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@metagenlab

metagenlab

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  1. mummer2circos mummer2circos Public

    Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments

    Python 100 24

  2. zDB zDB Public

    zDB: comparative bacterial genomics made easy

    HTML 31 4

  3. MeSS MeSS Public

    Snakemake pipeline for simulating shotgun metagenomic samples

    Python 18 2

  4. assembly_finder assembly_finder Public

    snakemake-powered cli to download genomes using NCBI datasets

    Python 12

  5. locus2genoplotr locus2genoplotr Public

    Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram

    Python 10 1

  6. zAMP zAMP Public

    zAMP is a bioinformatic pipeline designed for convenient, reproducible and scalable amplicon-based metagenomics

    R 8 5

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