Code

Gtdb v9#725

Code

Open

SilasK wants to merge 41 commits intomainmetagenome-atlas/atlas:mainfrom gtdbv9metagenome-atlas/atlas:gtdbv9Copy head branch name to clipboard

+9-12

Commits

Commits on Jun 4, 2024

• Correction of typos

  

  Waschina

  authored and

  SilasK

  committed
  e279d43

  Copy full SHA for e279d43

• Back-change heading closing tags

  Show description for df691ac
  

  Waschina

  authored and

  SilasK

  committed
  df691ac

  Copy full SHA for df691ac

• correct h2 tab

  SilasK

  committed
  54cdbb3

  Copy full SHA for 54cdbb3

• Update multiqc wrapper to newest version.

  Show description for 30b32b5
  

  njohner

  authored and

  SilasK

  committed
  30b32b5

  Copy full SHA for 30b32b5

• path to config file

  SilasK

  committed
  cbff856

  Copy full SHA for cbff856

• seperate log file does not work

  SilasK

  committed
  bfce186

  Copy full SHA for bfce186

Commits on Jun 6, 2024

• Merge branch 'master' into snake8

  SilasK

  authored
  3b8e685

  Copy full SHA for 3b8e685

Commits on Jun 23, 2024

• correct import of load_configfile

  SilasK

  committed
  f65f1f8

  Copy full SHA for f65f1f8

• add slurm plugin

  

  Kieser Silas

  committed
  eed9657

  Copy full SHA for eed9657

• spades 4

  

  Kieser Silas

  committed
  6d3ec54

  Copy full SHA for 6d3ec54

• error in mem definition

  

  Kieser Silas

  committed
  e84d76a

  Copy full SHA for e84d76a

Commits on Jun 24, 2024

• Merge remote-tracking branch 'origin/units-resources' into snake8

  

  Kieser Silas

  committed
  494844e

  Copy full SHA for 494844e

Commits on Jun 25, 2024

• fix-spades-mem_mb

  SilasK

  committed
  330df57

  Copy full SHA for 330df57

• path in bin report

  SilasK

  committed
  fe9cdc8

  Copy full SHA for fe9cdc8

• fix bin report path again

  SilasK

  committed
  df1e8bb

  Copy full SHA for df1e8bb

• update verstion and paths

  SilasK

  committed
  74a6a52

  Copy full SHA for 74a6a52

• use split download from gtdbtk

  SilasK

  committed
  1eddc34

  Copy full SHA for 1eddc34

• Merge branch 'master' into gtdbv9

  SilasK

  committed
  9a04528

  Copy full SHA for 9a04528

Commits on Jun 26, 2024

• url is not a path

  SilasK

  committed
  71ff4e2

  Copy full SHA for 71ff4e2

• more memory for gtdbtk aling

  SilasK

  committed
  367f1bf

  Copy full SHA for 367f1bf

Commits on Jul 27, 2024

• sterr and stdout log for extract gtdb

  SilasK

  committed
  b7c73a5

  Copy full SHA for b7c73a5

Commits on Jul 29, 2024

• my dram

  SilasK

  committed
  e905d3b

  Copy full SHA for e905d3b

• formating

  SilasK

  committed
  510ac16

  Copy full SHA for 510ac16

• move changelog

  SilasK

  committed
  c30ff08

  Copy full SHA for c30ff08

• github actions to automate changelog

  SilasK

  committed
  ee73864

  Copy full SHA for ee73864

• add codespell

  SilasK

  committed
  00e91d7

  Copy full SHA for 00e91d7

• add versioneer

  SilasK

  committed
  a9d2193

  Copy full SHA for a9d2193

• chore(main): release 2.18.2

  

  github-actions[bot]

  authored and

  SilasK

  committed
  927f64a

  Copy full SHA for 927f64a

• package is called metagneome-atlas

  SilasK

  committed
  5535622

  Copy full SHA for 5535622

• add formating

  SilasK

  committed
  01ff80b

  Copy full SHA for 01ff80b

• snakefmt formating

  SilasK

  committed
  330cc4f

  Copy full SHA for 330cc4f

• install snakefmt with bioconda

  SilasK

  committed
  16fc1b4

  Copy full SHA for 16fc1b4

• ignore some files

  SilasK

  committed
  d7cf4c4

  Copy full SHA for d7cf4c4

• update verstion and paths

  SilasK

  committed
  8326c57

  Copy full SHA for 8326c57

• use split download from gtdbtk

  SilasK

  committed
  ed35c07

  Copy full SHA for ed35c07

• specify target rule when downloading

  SilasK

  committed
  1ebc799

  Copy full SHA for 1ebc799

• format

  SilasK

  committed
  703780b

  Copy full SHA for 703780b

• sterr and stdout log for extract gtdb

  SilasK

  committed
  ae3b011

  Copy full SHA for ae3b011

• sterr and stdout log for extract gtdb

  SilasK

  committed
  e988caf

  Copy full SHA for e988caf

• Update CHANGELOG.md

  SilasK

  committed
  633c7b3

  Copy full SHA for 633c7b3

• Merge branch 'main' into gtdbv9

  SilasK

  committed
  aba8b30

  Copy full SHA for aba8b30