Overview

review provides helpful tools for organizing and performing quality control (QC) tasks.

With review, you are able to create and manage a QC log to track the QC history of all relevant files in your repository. While performing QC, diffQced() will show all the changes to the file since it had last been QCed.

Setup

To start using review, run logCreate(). This will create the QC log in the form of QClog.csv.

You can use logAssign() to add scripts needing to be QCed to the QC log. After completing QC, run logAccept(). This will add a row to the QClog.csv recording the current revision number to indicate when the file was QCed.

To identify which files need to be QCed, you can run logPending(). You can also run logSummary() to see the revision number for the most recent QC of each script.

Documentation

Public documentation of all functions is hosted at https://metrumresearchgroup.github.io/review/

Cheat Sheet

Development

review uses pkgr to manage development dependencies and renv to provide isolation. To replicate this environment,

1. clone the repo

2. install pkgr

3. open package in an R session and run renv::init(bare = TRUE)

   • install renv > 0.8.3-4 into default .libPaths() if not already installed

4. run pkgr install in terminal within package directory

5. restart session

Then, launch R with the repo as the working directory (open the project in RStudio). renv will activate and find the project library.

Getting help

If you encounter a clear bug, please file an issue with a minimal reproducible example on review.