migration-with-java-action #15
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| name: migration-with-java-action | |
| on: workflow_dispatch | |
| # wget or curl?! which is noisier | |
| # combine run statements? | |
| # could run some jobs in parallel | |
| jobs: | |
| migration-with-java-job: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install Poetry | |
| uses: snok/install-poetry@v1.3 | |
| - uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| run: poetry install --no-interaction --no-root | |
| - name: Install library | |
| run: poetry install --no-interaction | |
| - uses: actions/setup-java@v3 | |
| with: | |
| distribution: 'corretto' | |
| java-version: '17' | |
| - run: wget https://github.com/ontodev/robot/releases/download/v1.9.5/robot.jar | |
| - run: wget https://raw.githubusercontent.com/ontodev/robot/master/bin/robot | |
| - run: sudo chmod u+x robot | |
| # - run: ./robot convert --input project/owl/nmdc.owl.ttl --output project/owl/nmdc.ofn | |
| # - run: ls -l project/owl/nmdc.ofn | |
| - uses: foooomio/setup-jena@v2 | |
| - run: make squeaky-clean all test | |
| - run: make make-rdf | |
| - run: tdb2.tdbloader --loc=tdbcontent --graph=https://w3id.org/nmdc/nmdc project/owl/nmdc.owl.ttl | |
| - run: tdb2.tdbloader --loc=tdbcontent --graph=mongodb://mongo-loadbalancer.nmdc.production.svc.spin.nersc.gov:27017 local/mongo_as_nmdc_database_cuire_repaired.ttl | |
| - run: tdb2.tdbquery --loc=tdbcontent --query=assets/sparql/tdb-test.rq | |
| - run: tdb2.tdbquery --loc=tdbcontent --query=assets/sparql/tdb-graph-list.rq |