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MiXCR v2.0
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@dbolotin dbolotin released this 13 Sep 16:46
· 3537 commits to develop since this release
v2.0
1b5ed62

⚠️ This MiXCR version has no backward compatibility with *.vdjca / *.clns files produced by previous versions.

Major changes
  • New JSON-based reference library format (see RepSeq.IO)
  • Complete review of V/D/J/C gene library (see repository)
  • New simplified method to import IMGT library (see documentation)
  • All --loci options replaced with --chain (-l -> -c)
  • Removed option --diff-loci at align step
  • Added -OallowChimeras=true / false option at align step (better algorithm than was with --diff-loci)
  • Removed: option -u/--functional-only in align action
  • Many small fixes
Minor changes
  • Improved report content with absolute values for all rows and additional version info
  • Now report with run statistics is additionally printed to stdout
  • Execution time information added to report
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