CI-CD #2444
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| # Triggered on push and pull request events, schedule for data update | |
| on: | |
| push: | |
| pull_request: | |
| schedule: | |
| # every day at 21 UTC | |
| - cron: "0 21 * * *" | |
| name: CI-CD | |
| # renv with GitHub actions: https://rstudio.github.io/renv/articles/ci.html#github-actions | |
| jobs: | |
| CI-CD: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| # We keep a matrix for convenience, but we would typically just run on one | |
| # single OS and R version, aligned with the target deployment environment | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: '4.2.1'} | |
| env: | |
| # Access token for GitHub | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # Preserve package sources for informative references in case of errors | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| # Enable RStudio Package Manager to speed up package installation | |
| use-public-rspm: true | |
| - name: Activate renv and restore packages with cache | |
| uses: r-lib/actions/setup-renv@v2 | |
| # - name: Install system dependencies | |
| # env: | |
| # RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | |
| # run: | | |
| # Rscript -e "renv::install('r-hub/sysreqs')" | |
| # sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | |
| # sudo -s eval "$sysreqs" | |
| - name: Activate renv and restore packages with cache | |
| uses: r-lib/actions/setup-renv@v2 | |
| - name: Fetch and rebuild latest data | |
| if: github.event_name == 'schedule' | |
| run: | | |
| pkgload::load_all(export_all = FALSE, helpers = FALSE, attach_testthat = FALSE) | |
| build_data() | |
| shell: Rscript {0} | |
| - name: Install R CMD check | |
| run: install.packages("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: Check package | |
| uses: r-lib/actions/check-r-package@v2 | |
| - name: Commit and push updated data | |
| if: github.event_name == 'schedule' | |
| run: | | |
| git config --local user.email "actions@github.com" | |
| git config --local user.name "GitHub Actions" | |
| git add inst/datahub/\* | |
| git commit -m "Update DataHub data" || echo "No changes to commit" | |
| git pull --ff-only | |
| git push origin | |
| - name: Deploy to shinyapps.io | |
| # Continuous deployment only for pushes to the main / master branch | |
| if: github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master' | |
| env: | |
| SHINYAPPS_ACCOUNT: ${{ secrets.SHINYAPPS_ACCOUNT }} | |
| SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }} | |
| SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }} | |
| run: Rscript deploy/deploy-shinyapps.R |