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Despite
cim()
handlingpca
andspca
object via the same code, their output components are different. This PR adds the$x
and$rotation
components to thepca
object.This isn't the cleanest fix as it means there is essentially double ups in the
pca
object.pca.object$x
are the variates whilepca.object$variates
is the contains the same values but is structured a list of length 1. Downstream functions (such asnetwork()
andcim()
access these components differently. Will clean this up in the future