build/pkgs/cython: Pin to 3.0.2 #2155
Workflow file for this run
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| name: Build & Test | |
| on: | |
| pull_request: | |
| push: | |
| branches: ['**'] | |
| # Ignore pushes on tags to prevent two uploads of codecov reports | |
| tags-ignore: ['**'] | |
| workflow_dispatch: | |
| # Allow to run manually | |
| inputs: | |
| platform: | |
| description: 'Platform' | |
| required: true | |
| default: 'ubuntu-focal-standard' | |
| docker_tag: | |
| description: 'Docker tag' | |
| required: true | |
| default: 'dev' | |
| concurrency: | |
| # Cancel previous runs of this workflow for the same branch | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| get_ci_fixes: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| id: checkout | |
| uses: actions/checkout@v4 | |
| - name: Merge CI fixes from sagemath/sage | |
| run: | | |
| .ci/merge-fixes.sh | |
| env: | |
| GH_TOKEN: ${{ github.token }} | |
| - name: Store CI fixes in upstream artifact | |
| run: | | |
| mkdir -p upstream | |
| git format-patch --stdout test_base > upstream/ci_fixes.patch | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| path: upstream | |
| name: upstream | |
| build: | |
| runs-on: ubuntu-latest | |
| container: ghcr.io/sagemath/sage/sage-${{ github.event.inputs.platform || 'ubuntu-focal-standard' }}-with-targets:${{ github.event.inputs.docker_tag || 'dev'}} | |
| needs: [get_ci_fixes] | |
| steps: | |
| - name: Checkout | |
| id: checkout | |
| uses: actions/checkout@v4 | |
| - name: Update system packages | |
| id: prepare | |
| run: | | |
| export PATH="build/bin:$PATH" | |
| eval $(sage-print-system-package-command auto update) | |
| eval $(sage-print-system-package-command auto --spkg --yes --no-install-recommends install git) | |
| - name: Add prebuilt tree as a worktree | |
| id: worktree | |
| run: | | |
| set -ex | |
| git config --global user.email "ci-sage@example.com" | |
| git config --global user.name "Build & Test workflow" | |
| git config --global --add safe.directory $(pwd) | |
| # If actions/checkout downloaded our source tree using the GitHub REST API | |
| # instead of with git (because do not have git installed in our image), | |
| # we first make the source tree a repo. | |
| if [ ! -d .git ]; then git init && git add -A && git commit --quiet -m "new"; fi | |
| # Tag this state of the source tree "new". This is what we want to build and test. | |
| git tag -f new | |
| # Our container image contains a source tree in /sage with a full build of Sage. | |
| # But /sage is not a git repository. | |
| # We make /sage a worktree whose index is at tag "new". | |
| # We then commit the current sources and set the tag "old". (This keeps all mtimes unchanged.) | |
| # Then we update worktree and index with "git reset --hard new". | |
| # (This keeps mtimes of unchanged files unchanged and mtimes of changed files newer than unchanged files.) | |
| # Finally we reset the index to "old". (This keeps all mtimes unchanged.) | |
| # The changed files now show up as uncommitted changes. | |
| # The final "git add -N" makes sure that files that were added in "new" do not show | |
| # as untracked files, which would be removed by "git clean -fx". | |
| git worktree add --detach worktree-image | |
| rm -rf /sage/.git && mv worktree-image/.git /sage/ | |
| rm -rf worktree-image && ln -s /sage worktree-image | |
| if [ ! -f worktree-image/.gitignore ]; then cp .gitignore worktree-image/; fi | |
| (cd worktree-image && git add -A && git commit --quiet --allow-empty -m "old" -a && git tag -f old && git reset --hard new && git reset --quiet old && git add -N . && git status) | |
| - name: Download upstream artifact | |
| uses: actions/download-artifact@v3 | |
| with: | |
| path: upstream | |
| name: upstream | |
| - name: Apply CI fixes from sagemath/sage | |
| # After applying the fixes, make sure all changes are marked as uncommitted changes. | |
| run: | | |
| if [ -r upstream/ci_fixes.patch ]; then | |
| (cd worktree-image && git commit -q -m "current changes" --allow-empty -a && git am; git reset --quiet old; git add -N .) < upstream/ci_fixes.patch | |
| fi | |
| - name: Incremental build, test changed files (sage -t --new) | |
| id: incremental | |
| run: | | |
| # Now re-bootstrap and build. The build is incremental because we were careful with the timestamps. | |
| # We run tests with "sage -t --new"; this only tests the uncommitted changes. | |
| ./bootstrap && make build && ./sage -t --new -p2 | |
| working-directory: ./worktree-image | |
| env: | |
| MAKE: make -j2 --output-sync=recurse | |
| SAGE_NUM_THREADS: 2 | |
| - name: Build and test modularized distributions | |
| if: always() && steps.worktree.outcome == 'success' | |
| run: make V=0 tox && make pypi-wheels | |
| working-directory: ./worktree-image | |
| env: | |
| MAKE: make -j2 --output-sync=recurse | |
| SAGE_NUM_THREADS: 2 | |
| - name: Set up node to install pyright | |
| if: always() && steps.worktree.outcome == 'success' | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: '12' | |
| - name: Install pyright | |
| if: always() && steps.worktree.outcome == 'success' | |
| # Fix to v232 due to bug https://github.com/microsoft/pyright/issues/3239 | |
| run: npm install -g pyright@1.1.232 | |
| - name: Static code check with pyright | |
| if: always() && steps.worktree.outcome == 'success' | |
| run: pyright | |
| working-directory: ./worktree-image | |
| - name: Clean (fallback to non-incremental) | |
| id: clean | |
| if: always() && steps.worktree.outcome == 'success' && steps.incremental.outcome != 'success' | |
| run: | | |
| set -ex | |
| ./bootstrap && make doc-clean doc-uninstall sagelib-clean && git clean -fx src/sage && ./config.status | |
| working-directory: ./worktree-image | |
| env: | |
| MAKE: make -j2 | |
| SAGE_NUM_THREADS: 2 | |
| - name: Build | |
| # This step is needed because building the modularized distributions installs some optional packages, | |
| # so the editable install of sagelib needs to build the corresponding optional extension modules. | |
| id: build | |
| if: always() && (steps.incremental.outcome == 'success' || steps.clean.outcome == 'success') | |
| run: | | |
| make build | |
| working-directory: ./worktree-image | |
| env: | |
| MAKE: make -j2 --output-sync=recurse | |
| SAGE_NUM_THREADS: 2 | |
| - name: Pytest | |
| if: contains(github.ref, 'pytest') | |
| run: | | |
| ../sage -python -m pip install coverage pytest-xdist | |
| ../sage -python -m coverage run -m pytest -c tox.ini --doctest-modules || true | |
| working-directory: ./worktree-image/src | |
| env: | |
| # Increase the length of the lines in the "short summary" | |
| COLUMNS: 120 | |
| - name: Test all files (sage -t --all --long) | |
| if: always() && steps.build.outcome == 'success' | |
| run: | | |
| ../sage -python -m pip install coverage | |
| ../sage -python -m coverage run ./bin/sage-runtests --all --long -p2 --random-seed=286735480429121101562228604801325644303 | |
| working-directory: ./worktree-image/src | |
| - name: Prepare coverage results | |
| if: always() && steps.build.outcome == 'success' | |
| run: | | |
| ./venv/bin/python3 -m coverage combine src/.coverage/ | |
| ./venv/bin/python3 -m coverage xml | |
| find . -name *coverage* | |
| working-directory: ./worktree-image | |
| - name: Upload coverage to codecov | |
| if: always() && steps.build.outcome == 'success' | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./worktree-image/coverage.xml |