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[morae] LLM assisted code->AMR endpoint + support for CHIME-SIR (#637)
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## Summary of changes
Adds a new workflow endpoint to skema.rest
`llm-assisted-codebase-to-pn-amr` that slices the source code based on
model dynamic linespans determined by an llm. This greatly increases the
accuracy of AMR generation.

Enables support for generating AMR for the CHIME-SIR model, which was
previously failing with the normal `codebase-to-pn-amr` endpoint.

Adds a basic test case for testing CHIME-SIR->AMR generation.

Resolves #621
Resolves #628

---------

Co-authored-by: Justin <lieffers@arizona.edu> e740ac1
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2 changes: 1 addition & 1 deletion api/python/skema/img2mml/models/decoders/xfmer_decoder.html
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Expand Up @@ -365,7 +365,7 @@ <h3>Instance variables</h3>
<h3>Methods</h3>
<dl>
<dt id="skema.img2mml.models.decoders.xfmer_decoder.Transformer_Decoder.create_pad_mask"><code class="name flex">
<span>def <span class="ident">create_pad_mask</span></span>(<span>self, matrix: <built-in method tensor of type object at 0x7fa979f5b500>, pad_token: int) ‑> <built-in method tensor of type object at 0x7fa979f5b500></span>
<span>def <span class="ident">create_pad_mask</span></span>(<span>self, matrix: <built-in method tensor of type object at 0x7f1f2595b500>, pad_token: int) ‑> <built-in method tensor of type object at 0x7f1f2595b500></span>
</code></dt>
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<h3>Methods</h3>
<dl>
<dt id="skema.img2mml.models.encoding.positional_encoding_for_xfmer.PositionalEncoding.forward"><code class="name flex">
<span>def <span class="ident">forward</span></span>(<span>self, x: <built-in method tensor of type object at 0x7fa979f5b500>) ‑> <built-in method tensor of type object at 0x7fa979f5b500></span>
<span>def <span class="ident">forward</span></span>(<span>self, x: <built-in method tensor of type object at 0x7f1f2595b500>) ‑> <built-in method tensor of type object at 0x7f1f2595b500></span>
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<div class="desc"><p>Defines the computation performed at every call.</p>
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