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include OPM channels as megmag under .pick/get_coil_types() #1222

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merged 6 commits into from
Jul 30, 2024
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include OPM channels as megmag under .pick/get_coil_types() #1222

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edad62e
include OPM channels as megmag under .pick/get_coil_types()
AmaiaBA Jan 30, 2024
b6686b7
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jan 31, 2024
b83b563
Merge branch 'main' into main
sappelhoff May 28, 2024
f101984
logging contributions
AmaiaBA Jul 30, 2024
d6522ae
Merge branch 'main' into main
sappelhoff Jul 30, 2024
bc5da97
clean merge main
sappelhoff Jul 30, 2024
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4 changes: 4 additions & 0 deletions CITATION.cff
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Expand Up @@ -179,6 +179,10 @@ authors:
family-names: Welzel
affiliation: 'Department of Neurology, Kiel University, Germany'
orcid: 'https://orcid.org/0000-0003-4782-5360'
- given-names: Amaia
family-names: Benitez
affiliation: 'Magnetoencephalography Core, National Institutes of Health, Bethesda, Maryland, USA'
orcid: 'https://orcid.org/0000-0001-6364-7272'
- given-names: Alexandre
family-names: Gramfort
affiliation: 'Université Paris-Saclay, Inria, CEA, Palaiseau, France'
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1 change: 1 addition & 0 deletions doc/authors.rst
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Expand Up @@ -46,3 +46,4 @@
.. _Pierre Guetschel: https://github.com/PierreGtch
.. _Mara Wolter: https://github.com/marakw
.. _Julius Welzel: https://github.com/JuliusWelzel
.. _Amaia Benitez: https://github.com/AmaiaBA
3 changes: 2 additions & 1 deletion doc/whats_new.rst
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Expand Up @@ -17,7 +17,7 @@ Version 0.16 (unreleased)

The following authors contributed for the first time. Thank you so much! 🤩

* nobody yet
* `Amaia Benitez`_

The following authors had contributed before. Thank you for sticking around! 🤘

Expand All @@ -37,6 +37,7 @@ Detailed list of changes
^^^^^^^^^^^^^^^^^^^^^^^^^^^

- :func:`mne_bids.read_raw_bids` no longer warns about unit changes in channels upon reading, as that information is taken from ``channels.tsv`` and judged authorative, by `Stefan Appelhoff`_ (:gh:`1282`)
- MEG OPM channels are now experimentally included, by `Amaia Benitez`_ (:gh:`1222`)

🛠 Requirements
^^^^^^^^^^^^^^^
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5 changes: 5 additions & 0 deletions mne_bids/pick.py
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Expand Up @@ -46,6 +46,11 @@ def get_coil_types():
FIFF.FIFFV_COIL_NM_122,
FIFF.FIFFV_COIL_MAGNES_MAG,
FIFF.FIFFV_COIL_BABY_MAG,
# support for OPM data
FIFF.FIFFV_COIL_QUSPIN_ZFOPM_MAG, # QuSpin v1
FIFF.FIFFV_COIL_QUSPIN_ZFOPM_MAG2, # QuSpin v2
FIFF.FIFFV_COIL_FIELDLINE_OPM_MAG_GEN1, # FieldLine v1
FIFF.FIFFV_COIL_KERNEL_OPM_MAG_GEN1, # Kernel
),
megrefmag=(
FIFF.FIFFV_COIL_KIT_REF_MAG,
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