[pre-commit.ci] pre-commit autoupdate (#589) #211
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: 'tests' | |
| on: | |
| push: | |
| branches: | |
| - 'main' | |
| pull_request: | |
| branches: | |
| - '*' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.type }} | |
| cancel-in-progress: true | |
| jobs: | |
| # PIP + non-default stim channel + log level info | |
| job: | |
| name: '${{ matrix.os }} / ${{ matrix.kind }} / ${{ matrix.mne }}' | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| mne: stable | |
| kind: pip | |
| python: "3.10" # oldest | |
| - os: ubuntu-latest | |
| mne: dev | |
| kind: pip | |
| python: "3.12" # newest | |
| - os: macos-14 | |
| mne: dev | |
| kind: conda | |
| python: "3.12" | |
| - os: windows-latest | |
| mne: dev | |
| kind: conda | |
| python: "3.10" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| if: matrix.kind == 'pip' | |
| - uses: pyvista/setup-headless-display-action@main | |
| with: | |
| qt: true | |
| pyvista: false | |
| - uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: environment.yml | |
| environment-name: mne-nirs | |
| create-args: >- | |
| python=${{ matrix.python }} | |
| if: matrix.kind == 'conda' | |
| - run: pip install -r requirements_testing.txt | |
| - run: git clone https://github.com/mne-tools/mne-python | |
| - run: pip install --upgrade --pre -e ./mne-python "git+https://github.com/larsoner/nilearn@sklearn" | |
| if: matrix.mne == 'dev' | |
| name: Install MNE and nilearn dev | |
| # - run: pip install --upgrade --pre --force --only-binary=":all:" --index-url "https://pypi.anaconda.org/scientific-python-nightly-wheels/simple" "numpy>=2.0.0rc1" scipy h5py matplotlib pandas scikit-learn statsmodels "tables>=3.9.3.dev0" | |
| # if: matrix.mne == 'dev' && startsWith(matrix.os, 'ubuntu') | |
| # name: Install numpy, scipy, nilearn pre | |
| - run: pip install -ve . "numpy<2" | |
| - run: mne sys_info | |
| - run: ./tools/get_testing_version.sh | |
| working-directory: mne-python | |
| - uses: actions/cache@v4 | |
| with: | |
| key: ${{ env.TESTING_VERSION }} | |
| path: ~/mne_data | |
| - run: ./tools/github_actions_download.sh | |
| - run: pytest --cov=mne_nirs --cov-report xml -vv -m "not examples" "mne_nirs/" | |
| - uses: codecov/codecov-action@v5 | |
| if: success() |