Skip to content

Debugging conda mamba env setup pt 7 #82

Debugging conda mamba env setup pt 7

Debugging conda mamba env setup pt 7 #82

Triggered via push July 10, 2024 18:09
Status Cancelled
Total duration 1h 24m 29s
Artifacts 3

ci.yaml

on: push
Matrix: envs
Matrix: example
Matrix: test
Fit to window
Zoom out
Zoom in

Annotations

104 errors and 90 warnings
envs (macos-14, mamba)
The process '/Users/runner/micromamba-bin/micromamba' failed with exit code 1
envs (macos-14, micromamba)
ENOENT: no such file or directory, lstat '/Users/runner/work/_temp/setup-micromamba/micromamba-shell'
envs (macos-14, micromamba)
The process '/Users/runner/micromamba-bin/micromamba' failed with exit code 1
envs (macos-14, mamba)
ENOENT: no such file or directory, lstat '/Users/runner/work/_temp/setup-micromamba/micromamba-shell'
envs (ubuntu-20.04, micromamba)
Process completed with exit code 1.
envs (ubuntu-22.04, micromamba)
Process completed with exit code 1.
envs (ubuntu-24.04, micromamba)
Process completed with exit code 1.
example (ubuntu-20.04)
Process completed with exit code 1.
example (ubuntu-22.04)
Process completed with exit code 1.
envs (ubuntu-22.04, mamba)
Process completed with exit code 1.
envs (ubuntu-24.04, mamba)
Process completed with exit code 1.
envs (ubuntu-20.04, mamba)
Process completed with exit code 1.
test (ubuntu-latest, base, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, base, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, hafpipe-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, hafpipe-1, mamba)
Process completed with exit code 1.
test (ubuntu-22.04, base)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-22.04, base)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-bcftools-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-24.04, base)
Process completed with exit code 1.
test (ubuntu-24.04, base)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-fastp-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bowtie2-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
Process completed with exit code 1.
test (ubuntu-20.04, base)
Process completed with exit code 1.
test (ubuntu-20.04, base)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, duplicates-dedup-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, duplicates-dedup-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, duplicates-dedup-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, duplicates-dedup-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-cutadapt-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-cutadapt-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwaaln-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwaaln-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwaaln-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwaaln-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwaaln-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwaaln-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-bcftools-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-freebayes-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bowtie2-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-4, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-skewer-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-skewer-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-seqprep-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-seqprep-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-freebayes-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-freebayes-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-freebayes-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-bcftools-4, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, calling-bcftools-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-fastp-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-skewer-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-skewer-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, calling-bcftools-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwaaln-4, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, mapping-bwaaln-4, mamba)
Process completed with exit code 1.
test (ubuntu-latest, hafpipe-3, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, hafpipe-3, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-seqprep-2, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-seqprep-2, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, pileup-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, pileup-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (ubuntu-latest, trimming-cutadapt-1, mamba)
Process completed with exit code 1.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
The process '/usr/share/miniconda/condabin/mamba' failed with exit code 1
test (macos-13, base)
Process completed with exit code 1.
test (macos-13, base)
The process '/Users/runner/miniconda3/condabin/mamba' failed with exit code 1
example (macos-12)
Process completed with exit code 1.
test (macos-12, base)
Process completed with exit code 1.
test (macos-12, base)
The process '/usr/local/miniconda/condabin/mamba' failed with exit code 1
example (macos-11)
The run was canceled by @lczech.
test (ubuntu-latest, base, mamba)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, base, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
No files were found with the provided path: test/out-calling-haplotypecaller-1/test-run.log test/out-calling-haplotypecaller-1/logs/ test/out-calling-haplotypecaller-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, hafpipe-1, mamba)
No files were found with the provided path: test/out-hafpipe-1/test-run.log test/out-hafpipe-1/logs/ test/out-hafpipe-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, hafpipe-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-22.04, base)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-22.04, base)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, hafpipe-2, mamba)
No files were found with the provided path: test/out-hafpipe-2/test-run.log test/out-hafpipe-2/logs/ test/out-hafpipe-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, hafpipe-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
No files were found with the provided path: test/out-trimming-adapterremoval-1/test-run.log test/out-trimming-adapterremoval-1/logs/ test/out-trimming-adapterremoval-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-1, mamba)
No files were found with the provided path: test/out-calling-bcftools-1/test-run.log test/out-calling-bcftools-1/logs/ test/out-calling-bcftools-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-fastp-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-fastp-1, mamba)
No files were found with the provided path: test/out-trimming-fastp-1/test-run.log test/out-trimming-fastp-1/logs/ test/out-trimming-fastp-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-24.04, base)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-24.04, base)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
No files were found with the provided path: test/out-calling-haplotypecaller-3/test-run.log test/out-calling-haplotypecaller-3/logs/ test/out-calling-haplotypecaller-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-fastp-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-fastp-3, mamba)
No files were found with the provided path: test/out-trimming-fastp-3/test-run.log test/out-trimming-fastp-3/logs/ test/out-trimming-fastp-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
No files were found with the provided path: test/out-mapping-bowtie2-1/test-run.log test/out-mapping-bowtie2-1/logs/ test/out-mapping-bowtie2-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
No files were found with the provided path: test/out-calling-haplotypecaller-2/test-run.log test/out-calling-haplotypecaller-2/logs/ test/out-calling-haplotypecaller-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-20.04, base)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-20.04, base)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, duplicates-dedup-1, mamba)
No files were found with the provided path: test/out-duplicates-dedup-1/test-run.log test/out-duplicates-dedup-1/logs/ test/out-duplicates-dedup-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, duplicates-dedup-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, duplicates-dedup-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, duplicates-dedup-2, mamba)
No files were found with the provided path: test/out-duplicates-dedup-2/test-run.log test/out-duplicates-dedup-2/logs/ test/out-duplicates-dedup-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
No files were found with the provided path: test/out-mapping-bwa-mem-1/test-run.log test/out-mapping-bwa-mem-1/logs/ test/out-mapping-bwa-mem-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
No files were found with the provided path: test/out-trimming-cutadapt-2/test-run.log test/out-trimming-cutadapt-2/logs/ test/out-trimming-cutadapt-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwaaln-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwaaln-2, mamba)
No files were found with the provided path: test/out-mapping-bwaaln-2/test-run.log test/out-mapping-bwaaln-2/logs/ test/out-mapping-bwaaln-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwaaln-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwaaln-3, mamba)
No files were found with the provided path: test/out-mapping-bwaaln-3/test-run.log test/out-mapping-bwaaln-3/logs/ test/out-mapping-bwaaln-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwaaln-1, mamba)
No files were found with the provided path: test/out-mapping-bwaaln-1/test-run.log test/out-mapping-bwaaln-1/logs/ test/out-mapping-bwaaln-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwaaln-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
No files were found with the provided path: test/out-trimming-adapterremoval-3/test-run.log test/out-trimming-adapterremoval-3/logs/ test/out-trimming-adapterremoval-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-bcftools-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-3, mamba)
No files were found with the provided path: test/out-calling-bcftools-3/test-run.log test/out-calling-bcftools-3/logs/ test/out-calling-bcftools-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-freebayes-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-freebayes-2, mamba)
No files were found with the provided path: test/out-calling-freebayes-2/test-run.log test/out-calling-freebayes-2/logs/ test/out-calling-freebayes-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
No files were found with the provided path: test/out-mapping-bowtie2-2/test-run.log test/out-mapping-bowtie2-2/logs/ test/out-mapping-bowtie2-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, hafpipe-4, mamba)
No files were found with the provided path: test/out-hafpipe-4/test-run.log test/out-hafpipe-4/logs/ test/out-hafpipe-4/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, hafpipe-4, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-skewer-2, mamba)
No files were found with the provided path: test/out-trimming-skewer-2/test-run.log test/out-trimming-skewer-2/logs/ test/out-trimming-skewer-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-skewer-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
No files were found with the provided path: test/out-mapping-bwa-mem2-2/test-run.log test/out-mapping-bwa-mem2-2/logs/ test/out-mapping-bwa-mem2-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-seqprep-1, mamba)
No files were found with the provided path: test/out-trimming-seqprep-1/test-run.log test/out-trimming-seqprep-1/logs/ test/out-trimming-seqprep-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-seqprep-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-freebayes-3, mamba)
No files were found with the provided path: test/out-calling-freebayes-3/test-run.log test/out-calling-freebayes-3/logs/ test/out-calling-freebayes-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-freebayes-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
No files were found with the provided path: test/out-calling-haplotypecaller-4/test-run.log test/out-calling-haplotypecaller-4/logs/ test/out-calling-haplotypecaller-4/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-freebayes-1, mamba)
No files were found with the provided path: test/out-calling-freebayes-1/test-run.log test/out-calling-freebayes-1/logs/ test/out-calling-freebayes-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-freebayes-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
No files were found with the provided path: test/out-mapping-bwa-mem2-1/test-run.log test/out-mapping-bwa-mem2-1/logs/ test/out-mapping-bwa-mem2-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-4, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-4, mamba)
No files were found with the provided path: test/out-calling-bcftools-4/test-run.log test/out-calling-bcftools-4/logs/ test/out-calling-bcftools-4/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-fastp-2, mamba)
No files were found with the provided path: test/out-trimming-fastp-2/test-run.log test/out-trimming-fastp-2/logs/ test/out-trimming-fastp-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-fastp-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-skewer-1, mamba)
No files were found with the provided path: test/out-trimming-skewer-1/test-run.log test/out-trimming-skewer-1/logs/ test/out-trimming-skewer-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-skewer-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
No files were found with the provided path: test/out-trimming-adapterremoval-2/test-run.log test/out-trimming-adapterremoval-2/logs/ test/out-trimming-adapterremoval-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, calling-bcftools-2, mamba)
No files were found with the provided path: test/out-calling-bcftools-2/test-run.log test/out-calling-bcftools-2/logs/ test/out-calling-bcftools-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, calling-bcftools-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwaaln-4, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, mapping-bwaaln-4, mamba)
No files were found with the provided path: test/out-mapping-bwaaln-4/test-run.log test/out-mapping-bwaaln-4/logs/ test/out-mapping-bwaaln-4/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, hafpipe-3, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, hafpipe-3, mamba)
No files were found with the provided path: test/out-hafpipe-3/test-run.log test/out-hafpipe-3/logs/ test/out-hafpipe-3/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-seqprep-2, mamba)
No files were found with the provided path: test/out-trimming-seqprep-2/test-run.log test/out-trimming-seqprep-2/logs/ test/out-trimming-seqprep-2/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-seqprep-2, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, pileup-1, mamba)
No files were found with the provided path: test/out-pileup-1/test-run.log test/out-pileup-1/logs/ test/out-pileup-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, pileup-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
No files were found with the provided path: test/out-trimming-cutadapt-1/test-run.log test/out-trimming-cutadapt-1/logs/ test/out-trimming-cutadapt-1/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/linux-64 - https://conda.anaconda.org/conda-forge/linux-64 - https://conda.anaconda.org/anaconda/linux-64 - https://repo.anaconda.com/pkgs/main/linux-64 - https://repo.anaconda.com/pkgs/r/linux-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (macos-13, base)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (macos-13, base)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/osx-64 - https://conda.anaconda.org/conda-forge/osx-64 - https://conda.anaconda.org/anaconda/osx-64 - https://repo.anaconda.com/pkgs/main/osx-64 - https://repo.anaconda.com/pkgs/r/osx-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.
test (macos-12, base)
No files were found with the provided path: test/out-base/test-run.log test/out-base/logs/ test/out-base/.snakemake/log/ test/reference/logs/ test/reference/TAIR10_chr_all.dict. No artifacts will be uploaded.
test (macos-12, base)
PackagesNotFoundError: The following packages are not available from current channels: - python[version='3.12.*,3.7.10'] Current channels: - https://conda.anaconda.org/bioconda/osx-64 - https://conda.anaconda.org/conda-forge/osx-64 - https://conda.anaconda.org/anaconda/osx-64 - https://repo.anaconda.com/pkgs/main/osx-64 - https://repo.anaconda.com/pkgs/r/osx-64 To search for alternate channels that may provide the conda package you're looking for, navigate to https://anaconda.org and use the search bar at the top of the page.

Artifacts

Produced during runtime
Name Size
logs-example-macos-12 Expired
2.23 KB
logs-example-ubuntu-20.04 Expired
2.24 KB
logs-example-ubuntu-22.04 Expired
2.17 KB