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Fix install script for cases that nextflow already exists #570

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merged 1 commit into from
Mar 7, 2024

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@bartcharbon bartcharbon commented Mar 4, 2024

Fixes the absence of "nextflow" symlink if changing permissions failed due to the nextflow version already being installed by a different user.

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End-to-end tests are not executed by Travis CI, please execute manually:

  • APPTAINER_BIND=$PWD bash test/test.sh passes
  • Updated documentation

@bartcharbon bartcharbon marked this pull request as ready for review March 4, 2024 09:45
@dennishendriksen dennishendriksen merged commit b9e899b into main Mar 7, 2024
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@dennishendriksen dennishendriksen deleted the fix/install_nextflow branch March 7, 2024 06:57
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2 participants