Skip to content
@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

Pinned Loading

  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 239 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 55 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 16 3

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 244 repositories
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 239 CC-BY-4.0 54 425 (3 issues need help) 41 Updated Jan 29, 2025
  • emods Public

    Monarch and Linda Crrnic Center project on phenotype identification

    monarch-initiative/emods’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 29, 2025
  • zfin-genotype-to-phenotype-ingest Public
    monarch-initiative/zfin-genotype-to-phenotype-ingest’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 29, 2025
  • oncopacket Public

    A package to convert cancer data to GA4GH phenopacket

    monarch-initiative/oncopacket’s past year of commit activity
    Jupyter Notebook 7 MIT 1 22 4 Updated Jan 28, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 19 BSD-3-Clause 6 188 (3 issues need help) 9 Updated Jan 28, 2025
  • gpsea Public

    A Python library for discovery of genotype-phenotype associations

    monarch-initiative/gpsea’s past year of commit activity
    Python 5 MIT 1 14 0 Updated Jan 28, 2025
  • kghub-downloader Public

    Configuration based file caching downloader

    monarch-initiative/kghub-downloader’s past year of commit activity
    Python 6 0 4 2 Updated Jan 27, 2025
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 16 3 34 3 Updated Jan 27, 2025
  • medgen Public

    MedGen ingest.

    monarch-initiative/medgen’s past year of commit activity
    Python 2 0 9 0 Updated Jan 26, 2025
  • omim Public

    Data ingest pipeline for OMIM.

    monarch-initiative/omim’s past year of commit activity
    Jupyter Notebook 7 3 64 3 Updated Jan 26, 2025
View all repositories