Scheduled weekly dependency update for week 44 #834

pyup-bot · 2018-11-05T16:25:46Z

Update pytest from 3.9.3 to 3.10.0.

Changelog

3.10.0

==========================

Features
--------

- `2619 &lt;https://github.com/pytest-dev/pytest/issues/2619&gt;`_: Resume capturing output after ``continue`` with ``__import__(&quot;pdb&quot;).set_trace()``.

This also adds a new ``pytest_leave_pdb`` hook, and passes in ``pdb`` to the
existing ``pytest_enter_pdb`` hook.


- `4147 &lt;https://github.com/pytest-dev/pytest/issues/4147&gt;`_: Add ``-sw``, ``--stepwise`` as an alternative to ``--lf -x`` for stopping at the first failure, but starting the next test invocation from that test.  See `the documentation &lt;https://docs.pytest.org/en/latest/cache.htmlstepwise&gt;`__ for more info.


- `4188 &lt;https://github.com/pytest-dev/pytest/issues/4188&gt;`_: Make ``--color`` emit colorful dots when not running in verbose mode. Earlier, it would only colorize the test-by-test output if ``--verbose`` was also passed.


- `4225 &lt;https://github.com/pytest-dev/pytest/issues/4225&gt;`_: Improve performance with collection reporting in non-quiet mode with terminals.

The &quot;collecting …&quot; message is only printed/updated every 0.5s.



Bug Fixes
---------

- `2701 &lt;https://github.com/pytest-dev/pytest/issues/2701&gt;`_: Fix false ``RemovedInPytest4Warning: usage of Session... is deprecated, please use pytest`` warnings.


- `4046 &lt;https://github.com/pytest-dev/pytest/issues/4046&gt;`_: Fix problems with running tests in package ``__init__.py`` files.


- `4260 &lt;https://github.com/pytest-dev/pytest/issues/4260&gt;`_: Swallow warnings during anonymous compilation of source.


- `4262 &lt;https://github.com/pytest-dev/pytest/issues/4262&gt;`_: Fix access denied error when deleting stale directories created by ``tmpdir`` / ``tmp_path``.


- `611 &lt;https://github.com/pytest-dev/pytest/issues/611&gt;`_: Naming a fixture ``request`` will now raise a warning: the ``request`` fixture is internal and
should not be overwritten as it will lead to internal errors.



Improved Documentation
----------------------

- `4255 &lt;https://github.com/pytest-dev/pytest/issues/4255&gt;`_: Added missing documentation about the fact that module names passed to filter warnings are not regex-escaped.



Trivial/Internal Changes
------------------------

- `4272 &lt;https://github.com/pytest-dev/pytest/issues/4272&gt;`_: Display cachedir also in non-verbose mode if non-default.


- `4277 &lt;https://github.com/pytest-dev/pytest/issues/4277&gt;`_: pdb: improve message about output capturing with ``set_trace``.

Do not display &quot;IO-capturing turned off/on&quot; when ``-s`` is used to avoid
confusion.


- `4279 &lt;https://github.com/pytest-dev/pytest/issues/4279&gt;`_: Improve message and stack level of warnings issued by ``monkeypatch.setenv`` when the value of the environment variable is not a ``str``.

Links

PyPI: https://pypi.org/project/pytest
Changelog: https://pyup.io/changelogs/pytest/
Homepage: https://docs.pytest.org/en/latest/

Update virtualenv from 16.0.0 to 16.1.0.

Changelog

16.1.0

-------------------
* Fixed documentation to use pypi.org and correct curl options; :issue:`1042`
* bug fix: ensure prefix is absolute when creating a new virtual environment :issue:`1208`
* upgrade setuptools from ``39.1.0`` to ``40.5.0``
* upgrade wheel from ``0.31.1`` to ``0.32.2``
* upgrade pip from ``10.0.1`` to ``18.1``
* ``activate.csh`` does not use basename and handles newlines :issue:`1200`
* fix failure to copy on platforms that use lib64 :issue:`1189`
* enable tab-completion in the interactive interpreter by default, thanks to a new ``sys.__interactivehook__`` on Python 3 :issue:`967`
* suppress warning of usage of the deprecated ``imp`` module :issue:`1238`

Links

PyPI: https://pypi.org/project/virtualenv
Changelog: https://pyup.io/changelogs/virtualenv/
Homepage: https://virtualenv.pypa.io/

Update pyparsing from 2.2.2 to 2.3.0.

Changelog

2.3.0

-----------------------------
- NEW SUPPORT FOR UNICODE CHARACTER RANGES
This release introduces the pyparsing_unicode namespace class, defining
a series of language character sets to simplify the definition of alphas,
nums, alphanums, and printables in the following language sets:
. Arabic
. Chinese
. Cyrillic
. Devanagari
. Greek
. Hebrew
. Japanese (including Kanji, Katakana, and Hirigana subsets)
. Korean
. Latin1 (includes 7 and 8-bit Latin characters)
. Thai
. CJK (combination of Chinese, Japanese, and Korean sets)

For example, your code can define words using:

 korean_word = Word(pyparsing_unicode.Korean.alphas)

See their use in the updated examples greetingInGreek.py and
greetingInKorean.py.

This namespace class also offers access to these sets using their
unicode identifiers.

- POSSIBLE API CHANGE: Fixed bug where a parse action that explicitly 
returned the input ParseResults could add another nesting level in
the results if the current expression had a results name.

     vals = pp.OneOrMore(pp.pyparsing_common.integer)(&quot;int_values&quot;)
     
     def add_total(tokens):
         tokens[&#39;total&#39;] = sum(tokens)
         return tokens   this line can be removed

     vals.addParseAction(add_total)
     print(vals.parseString(&quot;244 23 13 2343&quot;).dump())

Before the fix, this code would print (note the extra nesting level):

 [244, 23, 13, 2343]
 - int_values: [244, 23, 13, 2343]
   - int_values: [244, 23, 13, 2343]
   - total: 2623
 - total: 2623

With the fix, this code now prints:

 [244, 23, 13, 2343]
 - int_values: [244, 23, 13, 2343]
 - total: 2623

This fix will change the structure of ParseResults returned if a 
program defines a parse action that returns the tokens that were 
sent in. This is not necessary, and statements like &quot;return tokens&quot; 
in the example above can be safely deleted prior to upgrading to 
this release, in order to avoid the bug and get the new behavior.

Reported by seron in Issue 22, nice catch!

- POSSIBLE API CHANGE: Fixed a related bug where a results name 
erroneously created a second level of hierarchy in the returned 
ParseResults. The intent for accumulating results names into ParseResults
is that, in the absence of Group&#39;ing, all names get merged into a
common namespace. This allows us to write:

    key_value_expr = (Word(alphas)(&quot;key&quot;) + &#39;=&#39; + Word(nums)(&quot;value&quot;))
    result = key_value_expr.parseString(&quot;a = 100&quot;) 
 
and have result structured as {&quot;key&quot;: &quot;a&quot;, &quot;value&quot;: &quot;100&quot;} 
instead of [{&quot;key&quot;: &quot;a&quot;}, {&quot;value&quot;: &quot;100&quot;}].

However, if a named expression is used in a higher-level non-Group 
expression that *also* has a name, a false sub-level would be created 
in the namespace:

     num = pp.Word(pp.nums)
     num_pair = (&quot;[&quot; + (num(&quot;A&quot;) + num(&quot;B&quot;))(&quot;values&quot;) + &quot;]&quot;)
     U = num_pair.parseString(&quot;[ 10 20 ]&quot;)
     print(U.dump())

Since there is no grouping, &quot;A&quot;, &quot;B&quot;, and &quot;values&quot; should all appear
at the same level in the results, as:

     [&#39;[&#39;, &#39;10&#39;, &#39;20&#39;, &#39;]&#39;]
     - A: &#39;10&#39;
     - B: &#39;20&#39;
     - values: [&#39;10&#39;, &#39;20&#39;]

Instead, an extra level of &quot;A&quot; and &quot;B&quot; show up under &quot;values&quot;:

     [&#39;[&#39;, &#39;10&#39;, &#39;20&#39;, &#39;]&#39;]
     - A: &#39;10&#39;
     - B: &#39;20&#39;
     - values: [&#39;10&#39;, &#39;20&#39;]
       - A: &#39;10&#39;
       - B: &#39;20&#39;

This bug has been fixed. Now, if this hierarchy is desired, then a
Group should be added:

     num_pair = (&quot;[&quot; + pp.Group(num(&quot;A&quot;) + num(&quot;B&quot;))(&quot;values&quot;) + &quot;]&quot;)

Giving:

     [&#39;[&#39;, [&#39;10&#39;, &#39;20&#39;], &#39;]&#39;]
     - values: [&#39;10&#39;, &#39;20&#39;]
       - A: &#39;10&#39;
       - B: &#39;20&#39;

But in no case should &quot;A&quot; and &quot;B&quot; appear in multiple levels. This bug-fix
fixes that.

If you have current code which relies on this behavior, then add or remove
Groups as necessary to get your intended results structure.

Reported by Athanasios Anastasiou.

- IndexError&#39;s raised in parse actions will get explicitly reraised 
as ParseExceptions that wrap the original IndexError. Since 
IndexError sometimes occurs as part of pyparsing&#39;s normal parsing 
logic, IndexErrors that are raised during a parse action may have
gotten silently reinterpreted as parsing errors. To retain the 
information from the IndexError, these exceptions will now be 
raised as ParseExceptions that reference the original IndexError. 
This wrapping will only be visible when run under Python3, since it
emulates &quot;raise ... from ...&quot; syntax. 

Addresses Issue 4, reported by guswns0528.

- Added Char class to simplify defining expressions of a single
character. (Char(&quot;abc&quot;) is equivalent to Word(&quot;abc&quot;, exact=1))

- Added class PrecededBy to perform lookbehind tests. PrecededBy is 
used in the same way as FollowedBy, passing in an expression that
must occur just prior to the current parse location.

For fixed-length expressions like a Literal, Keyword, Char, or a 
Word with an `exact` or `maxLen` length given, `PrecededBy(expr)` 
is sufficient. For varying length expressions like a Word with no 
given maximum length, `PrecededBy` must be constructed with an 
integer `retreat` argument, as in 
`PrecededBy(Word(alphas, nums), retreat=10)`, to specify the maximum 
number of characters pyparsing must look backward to make a match. 
pyparsing will check all the values from 1 up to retreat characters 
back from the current parse location.

When stepping backwards through the input string, PrecededBy does 
*not* skip over whitespace.

PrecededBy can be created with a results name so that, even though
it always returns an empty parse result, the result *can* include
named results.

Idea first suggested in Issue 30 by Freakwill.

- Updated FollowedBy to accept expressions that contain named results,
so that results names defined in the lookahead expression will be 
returned, even though FollowedBy always returns an empty list.
Inspired by the same feature implemented in PrecededBy.

Links

PyPI: https://pypi.org/project/pyparsing
Changelog: https://pyup.io/changelogs/pyparsing/
Repo: https://github.com/pyparsing/pyparsing/
Docs: https://pythonhosted.org/pyparsing/

Update filelock from 3.0.9 to 3.0.10.

The bot wasn't able to find a changelog for this release. Got an idea?

Links

Update paste from 3.0.1 to 3.0.4.

Changelog

3.0.3

-----

* Ensure pytest requirements set properly.

3.0.2

-----

* Encoding fixes in ``paste.fixture``.

Links

PyPI: https://pypi.org/project/paste
Changelog: https://pyup.io/changelogs/paste/
Docs: https://pythonpaste.readthedocs.io/

Update pytest-xdist from 1.23.2 to 1.24.0.

The bot wasn't able to find a changelog for this release. Got an idea?

Links

PyPI: https://pypi.org/project/pytest-xdist
Changelog: https://pyup.io/changelogs/pytest-xdist/
Repo: https://github.com/pytest-dev/pytest-xdist

Update urllib3 from 1.24 to 1.24.1.

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Links

PyPI: https://pypi.org/project/urllib3
Changelog: https://pyup.io/changelogs/urllib3/
Docs: https://urllib3.readthedocs.io/

Update hypothesis from 3.81.0 to 3.82.1.

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Links

Update setuptools from 40.4.3 to 40.5.0.

Changelog

40.5.0

-------

* 1335: In ``pkg_resources.normalize_path``, fix issue on Cygwin when cwd contains symlinks.
* 1502: Deprecated support for downloads from Subversion in package_index/easy_install.
* 1517: Dropped use of six.u in favor of `u&quot;&quot;` literals.
* 1520: Added support for ``data_files`` in ``setup.cfg``.
* 1525: Fixed rendering of the deprecation warning in easy_install doc.

Links

PyPI: https://pypi.org/project/setuptools
Changelog: https://pyup.io/changelogs/setuptools/
Repo: https://github.com/pypa/setuptools

Update SQLAlchemy from 1.2.12 to 1.2.13.

Changelog

1.2.13

:released: October 31, 2018

 .. change::
    :tags: bug, postgresql
    :tickets: 4337

    Added support for the :class:`.aggregate_order_by` function to receive
    multiple ORDER BY elements, previously only a single element was accepted.


 .. change::
    :tags: bug, mysql
    :tickets: 4348

    Added word ``function`` to the list of reserved words for MySQL, which is
    now a keyword in MySQL 8.0

 .. change::
     :tags: feature, sql
     :versions: 1.3.0b1

     Refactored :class:`.SQLCompiler` to expose a
     :meth:`.SQLCompiler.group_by_clause` method similar to the
     :meth:`.SQLCompiler.order_by_clause` and :meth:`.SQLCompiler.limit_clause`
     methods, which can be overridden by dialects to customize how GROUP BY
     renders.  Pull request courtesy Samuel Chou.

 .. change::
    :tags: bug, misc

    Fixed issue where part of the utility language helper internals was passing
    the wrong kind of argument to the Python ``__import__`` builtin as the list
    of modules to be imported.  The issue produced no symptoms within the core
    library but could cause issues with external applications that redefine the
    ``__import__`` builtin or otherwise instrument it. Pull request courtesy Joe
    Urciuoli.

 .. change::
    :tags: bug, orm
    :tickets: 4349

    Fixed bug where &quot;dynamic&quot; loader needs to explicitly set the &quot;secondary&quot;
    table in the FROM clause of the query, to suit the case where the secondary
    is a join object that is otherwise not pulled into the query from its
    columns alone.


 .. change::
    :tags: bug, orm, declarative
    :tickets: 4350

    Fixed regression caused by :ticket:`4326` in version 1.2.12 where using
    :class:`.declared_attr` with a mixin in conjunction with
    :func:`.orm.synonym` would fail to map the synonym properly to an inherited
    subclass.

 .. change::
    :tags: bug, misc, py3k
    :tickets: 4339

    Fixed additional warnings generated by Python 3.7 due to changes in the
    organization of the Python ``collections`` and ``collections.abc`` packages.
    Previous ``collections`` warnings were fixed in version 1.2.11. Pull request
    courtesy xtreak.

 .. change::
    :tags: bug, ext

    Added missing ``.index()`` method to list-based association collections
    in the association proxy extension.

 .. change::
    :tags: bug, mysql
    :tickets: 4344

    Added a workaround for a MySQL bug 88718 introduced in the 8.0 series,
    where the reflection of a foreign key constraint is not reporting the
    correct case sensitivity for the referred column, leading to errors during
    use of the reflected constraint such as when using the automap extension.
    The workaround emits an additional query to the information_schema tables in
    order to retrieve the correct case sensitive name.

 .. change::
    :tags: bug, sql
    :tickets: 4341

    Fixed bug where the :paramref:`.Enum.create_constraint` flag on  the
    :class:`.Enum` datatype would not be propagated to copies of the type, which
    affects use cases such as declarative mixins and abstract bases.

 .. change::
    :tags: bug, orm, declarative
    :tickets: 4352

    The column conflict resolution technique discussed at
    :ref:`declarative_column_conflicts` is now functional for a :class:`.Column`
    that is also a primary key column.  Previously, a check for primary key
    columns declared on a single-inheritance subclass would occur before the
    column copy were allowed to pass.


.. changelog::

Links

PyPI: https://pypi.org/project/sqlalchemy
Changelog: https://pyup.io/changelogs/sqlalchemy/
Homepage: http://www.sqlalchemy.org

Update connexion from 1.5.3 to 2.0.0.

The bot wasn't able to find a changelog for this release. Got an idea?

Links

PyPI: https://pypi.org/project/connexion
Changelog: https://pyup.io/changelogs/connexion/
Repo: https://github.com/zalando/connexion

Update python-dateutil from 2.7.3 to 2.7.5.

Changelog

2.7.4

==========================

Data updates
------------

- Updated tzdata version to 2018f.

Links

PyPI: https://pypi.org/project/python-dateutil
Changelog: https://pyup.io/changelogs/python-dateutil/
Docs: https://dateutil.readthedocs.io

…18-11-05

nthomas-mozilla · 2018-11-06T01:45:11Z

@allan-silva Looks like we have some bustage from connexion v2.0 switching from swagger-spec-validator to openapi-spec-validator. I see spec-synthase uses the former, so we might be running into some compat issues. What do you think the best way forward here is ?

allan-silva · 2018-11-06T03:36:11Z

@nthomas-mozilla , I think we should stay in 1.x for now. I'll try look (in next weekend) if it is possible change spec-synthase to support both validators . Spec-synthase performs validations only in the CLI tool or from a explicity call to validate() func.

Probably will be necessary review the Balrog api specs, once it is not strict compliant with Swagger 2.0.

nthomas-mozilla · 2018-11-09T01:25:59Z

Thanks Allan. We have bug 1387064 on file already to modify the api specs.

pyup-bot and others added 22 commits November 5, 2018 11:25

Update pytest from 3.9.3 to 3.10.0

8bd8ca0

Update pytest from 3.9.3 to 3.10.0

614d854

Update virtualenv from 16.0.0 to 16.1.0

c367084

Update virtualenv from 16.0.0 to 16.1.0

3cd4fc5

Update pyparsing from 2.2.2 to 2.3.0

273e065

Update pyparsing from 2.2.2 to 2.3.0

bcc80bb

Update pyparsing from 2.2.2 to 2.3.0

d390245

Update filelock from 3.0.9 to 3.0.10

0599943

Update filelock from 3.0.9 to 3.0.10

630978a

Update paste from 3.0.1 to 3.0.4

3ee9618

Update pytest-xdist from 1.23.2 to 1.24.0

e1d2fb6

Update urllib3 from 1.24 to 1.24.1

1b6ef2b

Update urllib3 from 1.24 to 1.24.1

ffaed6c

Update urllib3 from 1.24 to 1.24.1

22bb581

Update hypothesis from 3.81.0 to 3.82.1

bf2596a

Update setuptools from 40.4.3 to 40.5.0

d4212c4

Update sqlalchemy from 1.2.12 to 1.2.13

d0ff207

Update connexion from 1.5.3 to 2.0.0

b33b17d

Update python-dateutil from 2.7.3 to 2.7.5

71e9b77

Add openapi-spec-validator for connexion

c46b653

Merge branch flake8 fixes from 'master' into pyup-scheduled-update-20…

b428a81

…18-11-05

Fix setup of connexion

c3804ec

Revert connexion changes and pin to v1.5.3

fbfb261

nthomas-mozilla approved these changes Nov 8, 2018

View reviewed changes

nthomas-mozilla merged commit cee9133 into master Nov 8, 2018

nthomas-mozilla deleted the pyup-scheduled-update-2018-11-05 branch November 8, 2018 23:31

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Scheduled weekly dependency update for week 44 #834

Scheduled weekly dependency update for week 44 #834

pyup-bot commented Nov 5, 2018

nthomas-mozilla commented Nov 6, 2018

allan-silva commented Nov 6, 2018 •

edited

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nthomas-mozilla commented Nov 9, 2018

Scheduled weekly dependency update for week 44 #834

Scheduled weekly dependency update for week 44 #834

Conversation

pyup-bot commented Nov 5, 2018

Update pytest from 3.9.3 to 3.10.0.

3.10.0

Update virtualenv from 16.0.0 to 16.1.0.

16.1.0

Update pyparsing from 2.2.2 to 2.3.0.

2.3.0

Update filelock from 3.0.9 to 3.0.10.

Update paste from 3.0.1 to 3.0.4.

3.0.3

3.0.2

Update pytest-xdist from 1.23.2 to 1.24.0.

Update urllib3 from 1.24 to 1.24.1.

Update hypothesis from 3.81.0 to 3.82.1.

Update setuptools from 40.4.3 to 40.5.0.

40.5.0

Update SQLAlchemy from 1.2.12 to 1.2.13.

1.2.13

Update connexion from 1.5.3 to 2.0.0.

Update python-dateutil from 2.7.3 to 2.7.5.

2.7.4

nthomas-mozilla commented Nov 6, 2018

allan-silva commented Nov 6, 2018 • edited Loading

nthomas-mozilla commented Nov 9, 2018

allan-silva commented Nov 6, 2018 •

edited

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