The sequence viewer is a super easy javascript library to use in order to draw a protein sequence in a readable way.
Live demo: https://cdn.rawgit.com/calipho-sib/sequence-viewer/master/examples/index.html
Simple example: https://cdn.rawgit.com/calipho-sib/sequence-viewer/master/examples/simple.html
- Include the library using bower or npm or simply by including the javascript sequence-viewer.js
//BOWER//
bower install sequence-viewer
//NODE//
npm install sequence-viewer
- Specify a div in your html
<div id="sequence-viewer"></div>
- Create an instance of Sequence in javascript and apply the render method
//For Node add before : var Sequence = require("sequence-viewer"); //
var seq= new Sequence('MALWMRLLPLLALLALWGPGPGAGSLQPLALEGSLQKRGIVEQCCTSICSLYQLENYCN');
seq.render('#sequence-viewer');
- Et voila!
Note: if you choose the later approach with only the main javascript you should also include the dependencies, jquery,handlebars and bootstrap.min.css
Check out this page for a better understanding of how to use the sequence viewer and its possibilities :
- Show chars per line
- Wrap lines
- Highlight
- Coverage
- Labels text and color
- toolbar (chars per line)
- search
https://search.nextprot.org/entry/NX_P01308/view/proteomics
If you have any problem or suggestion please open an issue here.
git clone https://github.com/calipho-sib/sequence-viewer.git
npm install (will install the development dependencies)
bower install (will install the browser dependencies)
...make your changes and modifications...
npm run dist (will create the min & bundle versions in dist/)
npm run build (will create the bundle js & css in build/ for node)
grunt bump (will push and add a new release)
npm publish (will publish in npm)
This software is licensed under the GNU GPL v2 license, quoted below.
Copyright (c) 2015, SIB Swiss Institute of Bioinformatics