vcf2maf v1.6.10
- Support for VEP v86
vcf2maf
canliftOver
variants before annotation (e.g. FromGRCh37
toGRCh38
,hg19
toGRCh37
)vcf2maf
can store annotated VCF in a different folder using new argument--tmp-dir
- Updates to isoform overrides, in particular for MSKCC's new IMPACT v6 gene panel
- Other minor fixes