MakieRipserer.jl

Experimental Makie support for Ripserer.jl.

API

plot(diagrams; kwargs...)
plot_barcode(diagrams; kwargs...)

Plot PersistenceDiagram or a collection of them as diagram or barcode.

Keyword args:

• infinity: set the position of infinity line.
• palette: set a palette from PlotUtils.jl. Defaults to :default.
• time::Observable: optional. Display current time on plot.

Examples

plot(simplices, points; kwargs...)

Plot simplices over points. simplices can be an AbstractSimplex, a collection of simplices or AbstractChainElements or RepresentativeInterval.

Keyword args:

• pointcolor, edgecolor, trianglecolor: set colors of drawn simplices. Can be an Integer (position in palette) or color.
• palette: set a palette from PlotUtils.jl. Defaults to :default.
• shading: defaults to false.
• transparency: defaults to true.

Example

plot(::AbstractRipsFiltration, points; time, kwargs...)

Plot the triangles and edges of Rips filtration at time over points.

Keyword args:

• pointcolor, edgecolor, trianglecolor: set colors of drawn simplices. Can be an Integer (position in palette) or color.
• palette: set a palette from PlotUtils.jl. Defaults to :default.
• shading: defaults to false.
• transparency: defaults to false.
• markersize: defaults to 1.
• linewidth: defaults to 1.
• time: an observable that controls the time at which to show the filtration.

Warning: Filtrations, particularly Rips, can be very large.

MakieRipserer.app(points, filtration=Alpha(points))

View filtration, diagram, and barcode in interactive app.

Examples