Documentation for poRe, which is available from sourceforge
This documentation is designed to work with version 0.17
The major aspect of this release is the release of two new GUIs (graphical user interfaces) - these are for testing only and should be considered a beta release. Please use and provide feedback!
In future, these GUIs should be what you use to extract metadata and FASTQ/A.
However all of the old familiar functions are still there and are still supported if you want to use them.
The pore_rt() GUI is designed to run alongside metrichor and can extract FASTQ and metadata whilst metrichor is running
The pore_parallel() GUI is designed to run after FAST5 files have been base-called, and extracts FASTQ and metadata using a point-and-click interface.
Please, please, please sign up to the announce and support mailing lists
Send an E-mail to the support list and we will get back to you ASAP
Listen to the announce list for updates to the software.