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Achievement: Quickdraw

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  1. BigPhenomics/cubeglm BigPhenomics/cubeglm Public

    Python implementation of general linear model for quantifying fluorophores in fluorescent hyperspectral images

    Jupyter Notebook 4

  2. mtmcskat mtmcskat Public

    Cluster-friendly interface for SKAT with adaptive resampling, multi-threading over SNP windows and permutations, and higher-level parallelization over chromosomes/scaffolds.

    R 4

  3. BigPhenomics/GMOnotebook BigPhenomics/GMOnotebook Public

    Templates for workflows cross-analyzing fluorescent hyperspectral regression with deep segmentation to study plant tissue culture transformation rates

    Jupyter Notebook 1 1

  4. BigPhenomics/cubeml BigPhenomics/cubeml Public

    Interface to apply machine learning to segmentation of hyperspectral images (hypercubes)

    Jupyter Notebook

  5. gpt-revcomp-eval gpt-revcomp-eval Public

    Evals for GPT model abilities to provide reverse complements of DNA sequences

    Jupyter Notebook 1

  6. terminal_jupyter_intro terminal_jupyter_intro Public

    Introduction tutorial for command line basics