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| # napari 0.5.4 | ||
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| *Friday, Sep 27, 2024* | ||
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| We’re happy to announce the release of napari 0.5.4! | ||
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| napari is a fast, interactive, multi-dimensional image viewer for Python. It’s designed for exploring, annotating, and analyzing multi-dimensional images. It’s built on Qt (for the GUI), VisPy (for performant GPU-based rendering), and the scientific Python stack (NumPy, SciPy, and friends). | ||
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| For more information, examples, and documentation, please visit our website: https://napari.org/ | ||
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| ## Highlights | ||
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| Another release with a lot of bug fixes, but also some (more!) improvements to | ||
| Shapes layer performance ([#7144](https://github.com/napari/napari/pull/7144), | ||
| [#7256](https://github.com/napari/napari/pull/7256)), and a few nice | ||
| usability/quality of life features! | ||
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| - you can now follow the value under the cursor around in images in 3D view as | ||
| well as 2D ([#7126](https://github.com/napari/napari/pull/7126)) | ||
| - Use standard keyboard shortcuts to zoom in and out ({kbd}`Command/Ctrl+=`, | ||
| {kbd}`Command/Ctrl+-`) and to zoom-to-fit ({kbd}`Command/Ctrl+0`) | ||
| ([#7200](https://github.com/napari/napari/pull/7200)) | ||
| - you can now save tiff files larger than 4GB | ||
| ([#7242](https://github.com/napari/napari/pull/7242)) | ||
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| Finally, we're starting some work on tweaking the UI to make it more | ||
| self-consistent, with the ultimate goal of adding functionality such as showing | ||
| common controls when multiple layers are selected, so that, for example, you | ||
| can select multiple layers and adjust all their opacity settings together. As | ||
| the first step for this, the *layer blending* controls have been moved directly | ||
| under the opacity control, so that all per-layer controls are next to each | ||
| other in the UI ([#7202](https://github.com/napari/napari/pull/7202)) | ||
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| Read on for all the changes in this version! | ||
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| ## New Features | ||
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| - enable get_value_3d for image layers ([#7126](https://github.com/napari/napari/pull/7126)) | ||
| - Preserve area of dock widgets between sessions ([#7247](https://github.com/napari/napari/pull/7247)) | ||
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| ## Improvements | ||
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| - Speed up `get_status` for Shapes layer by using bounding boxes ([#7144](https://github.com/napari/napari/pull/7144)) | ||
| - Enh: Add zoom options and keybindings to View menu ([#7200](https://github.com/napari/napari/pull/7200)) | ||
| - [ux/ui] Put blending controls under opacity slider in layer controls ([#7202](https://github.com/napari/napari/pull/7202)) | ||
| - Enable conflicts detection with layer keybindings when changing viewer ones and add group info to conflicts popup ([#7231](https://github.com/napari/napari/pull/7231)) | ||
| - Speedup `_is_convex` by avoid calling `np.roll` ([#7256](https://github.com/napari/napari/pull/7256)) | ||
| - Sort plugin manifests in alphabetical order for registration ([#7266](https://github.com/napari/napari/pull/7266)) | ||
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| ## Performance | ||
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| - Speed up `get_status` for Shapes layer by using bounding boxes ([#7144](https://github.com/napari/napari/pull/7144)) | ||
| - Speedup `_is_convex` by avoid calling `np.roll` ([#7256](https://github.com/napari/napari/pull/7256)) | ||
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| ## Bug Fixes | ||
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| - start/stop status thread on show/hide main window ([#7240](https://github.com/napari/napari/pull/7240)) | ||
| - Added support for saving tiff files > 4GB :) ([#7242](https://github.com/napari/napari/pull/7242)) | ||
| - Accept any Mapping as output of a plugin widget ([#7250](https://github.com/napari/napari/pull/7250)) | ||
| - Eliminate nearly all Qt widget leaks by using qtbot ([#7251](https://github.com/napari/napari/pull/7251)) | ||
| - Enforce minimum side length when guessing if image is RGB ([#7273](https://github.com/napari/napari/pull/7273)) | ||
| - Fix color shuffling for bool labels ([#7294](https://github.com/napari/napari/pull/7294)) | ||
| - Fix cursor dimensionality race condition ([#7295](https://github.com/napari/napari/pull/7295)) | ||
| - Fix overflow error in shuffle colormap for signed integer labels ([#7296](https://github.com/napari/napari/pull/7296)) | ||
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| ## Documentation | ||
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| - Add beanli161514 to citation file ([#7272](https://github.com/napari/napari/pull/7272)) | ||
| - Doc/metadata: add jni's ORCID to the CITATION.cff file ([#7275](https://github.com/napari/napari/pull/7275)) | ||
| - Style fix: use recommended capitalization for "GitHub" in README ([#7284](https://github.com/napari/napari/pull/7284)) | ||
| - Add psygnal and pydantic to napari --info ([#7285](https://github.com/napari/napari/pull/7285)) | ||
| - Move images to _static folder ([docs#483](https://github.com/napari/docs/pull/483)) | ||
| - Update version switcher to add 0.5.3 ([docs#488](https://github.com/napari/docs/pull/488)) | ||
| - Move release notes to be under Usage ([docs#489](https://github.com/napari/docs/pull/489)) | ||
| - Update release guide ([docs#491](https://github.com/napari/docs/pull/491)) | ||
| - Use `get_qapp` or `get_app_model` instead of `get_app` ([docs#495](https://github.com/napari/docs/pull/495)) | ||
| - Add 0.5.4 release notes ([docs#496](https://github.com/napari/docs/pull/496)) | ||
| - Add note about questions in landing page ([docs#498](https://github.com/napari/docs/pull/498)) | ||
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| ## Other Pull Requests | ||
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| - Update script for vendored modules ([#5779](https://github.com/napari/napari/pull/5779)) | ||
| - Update `certifi`, `dask`, `hypothesis`, `ipython`, `numpy`, `qtconsole`, `rich`, `scipy`, `tifffile` ([#7212](https://github.com/napari/napari/pull/7212)) | ||
| - Block zarr 3.0.0a1 and 3.0.0a2 in pre-release tests ([#7217](https://github.com/napari/napari/pull/7217)) | ||
| - Add autouse fixture that clears cached property `Action.injected` ([#7224](https://github.com/napari/napari/pull/7224)) | ||
| - Update `tifffile` ([#7235](https://github.com/napari/napari/pull/7235)) | ||
| - CI benchmark run comment will now include results table ([#7237](https://github.com/napari/napari/pull/7237)) | ||
| - [pre-commit.ci] pre-commit autoupdate ([#7239](https://github.com/napari/napari/pull/7239)) | ||
| - Fix coverage and debug artifacts upload ([#7241](https://github.com/napari/napari/pull/7241)) | ||
| - Replaced broken link to the "Translations" page :) ([#7243](https://github.com/napari/napari/pull/7243)) | ||
| - Alow to call benchmark that do not have params ([#7252](https://github.com/napari/napari/pull/7252)) | ||
| - Block zarr=3.0.0a3 to fix pre-release tests ([#7254](https://github.com/napari/napari/pull/7254)) | ||
| - Change type of layer Metadata from dict to Mapping ([#7257](https://github.com/napari/napari/pull/7257)) | ||
| - Update `fsspec`, `hypothesis`, `pydantic`, `tensorstore`, `virtualenv`, `zarr` ([#7258](https://github.com/napari/napari/pull/7258)) | ||
| - Deprecate usage of `get_app` functions to get `QApplication` or `NapariApplication` instances ([#7269](https://github.com/napari/napari/pull/7269)) | ||
| - Block `zarr==3.0.0a4` ([#7271](https://github.com/napari/napari/pull/7271)) | ||
| - Update `dask`, `hypothesis`, `napari-plugin-manager`, `pandas`, `pydantic`, `pytest`, `rich`, `tifffile`, `virtualenv`, `xarray` ([#7274](https://github.com/napari/napari/pull/7274)) | ||
| - [pre-commit.ci] pre-commit autoupdate ([#7276](https://github.com/napari/napari/pull/7276)) | ||
| - Fix `test_windows_grouping_overwrite` skip condition and asserts ([#7281](https://github.com/napari/napari/pull/7281)) | ||
| - Update menu sorting tests still using `mock_app` and `get_app` instead of `mock_app_model` and `get_app_model` ([#7283](https://github.com/napari/napari/pull/7283)) | ||
| - Remove obsolete self from layout argument ([#7291](https://github.com/napari/napari/pull/7291)) | ||
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| ## 11 authors added to this release (alphabetical) | ||
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| (+) denotes first-time contributors 🥳 | ||
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| - [BeanLi](https://github.com/napari/napari/commits?author=beanli161514) - @beanli161514 | ||
| - [Daniel Althviz Moré](https://github.com/napari/napari/commits?author=dalthviz) ([docs](https://github.com/napari/docs/commits?author=dalthviz)) - @dalthviz | ||
| - [Draga Doncila Pop](https://github.com/napari/napari/commits?author=DragaDoncila) - @DragaDoncila | ||
| - [Grzegorz Bokota](https://github.com/napari/napari/commits?author=Czaki) - @Czaki | ||
| - [Ikko Eltociear Ashimine](https://github.com/napari/napari/commits?author=eltociear) - @eltociear + | ||
| - [Juan Nunez-Iglesias](https://github.com/napari/napari/commits?author=jni) ([docs](https://github.com/napari/docs/commits?author=jni)) - @jni | ||
| - [Lorenzo Gaifas](https://github.com/napari/napari/commits?author=brisvag) - @brisvag | ||
| - [Lucy Liu](https://github.com/napari/napari/commits?author=lucyleeow) - @lucyleeow | ||
| - [Melissa Weber Mendonça](https://github.com/napari/docs/commits?author=melissawm) - @melissawm | ||
| - [Peter Sobolewski](https://github.com/napari/napari/commits?author=psobolewskiPhD) - @psobolewskiPhD | ||
| - [Sammy Hansali](https://github.com/napari/napari/commits?author=sammyhansali) - @sammyhansali + | ||
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| ## 13 reviewers added to this release (alphabetical) | ||
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| (+) denotes first-time contributors 🥳 | ||
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| - [andrew sweet](https://github.com/napari/docs/commits?author=andy-sweet) - @andy-sweet | ||
| - [Ashley Anderson](https://github.com/napari/docs/commits?author=aganders3) - @aganders3 | ||
| - [Daniel Althviz Moré](https://github.com/napari/napari/commits?author=dalthviz) ([docs](https://github.com/napari/docs/commits?author=dalthviz)) - @dalthviz | ||
| - [Draga Doncila Pop](https://github.com/napari/napari/commits?author=DragaDoncila) - @DragaDoncila | ||
| - [Grzegorz Bokota](https://github.com/napari/napari/commits?author=Czaki) - @Czaki | ||
| - [jaime rodriguez-guerra](https://github.com/napari/docs/commits?author=jaimergp) - @jaimergp | ||
| - [Juan Nunez-Iglesias](https://github.com/napari/napari/commits?author=jni) ([docs](https://github.com/napari/docs/commits?author=jni)) - @jni | ||
| - [kyle i. s. harrington](https://github.com/napari/docs/commits?author=kephale) - @kephale | ||
| - [Lorenzo Gaifas](https://github.com/napari/napari/commits?author=brisvag) - @brisvag | ||
| - [Lucy Liu](https://github.com/napari/napari/commits?author=lucyleeow) - @lucyleeow | ||
| - [Melissa Weber Mendonça](https://github.com/napari/docs/commits?author=melissawm) - @melissawm | ||
| - [Peter Sobolewski](https://github.com/napari/napari/commits?author=psobolewskiPhD) - @psobolewskiPhD | ||
| - [Wouter-Michiel Vierdag](https://github.com/napari/docs/commits?author=melonora) - @melonora | ||
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