Support for Slurm 23.02?

[mwharvey521]

We recently updated our HPC cluster and Galaxy server, and slurm-drmaa no longer seems to work properly. Is there any chance of getting it updated to work with the most recent version of Slurm - 23.02?

[IBEXCluster]

Dear @mwharvey521
Is it possible to give it a try this workaround:

export DRMAA_LIBRARY_PATH=lib.slurm-22.05.6/libdrmaa.so.1
export LD_LIBRARY_PATH=lib.slurm-22.05.6:$LD_LIBRARY_PATH

This workaround is used as a temporary solution for our regular operation which uses slurm-drmaa. :-)

[mwharvey521]

Thanks for the response. I'm not sure what setting those variables is trying to point to. We are running slurm-23.02.01 on a Rocky 8 Linux system: ***@***.*** ~]$ export DRMAA_LIBRARY_PATH=lib.slurm-22.05.6/libdrmaa.so.1 ***@***.*** ~]$ export LD_LIBRARY_PATH=lib.slurm-22.05.6:$LD_LIBRARY_PATH ***@***.*** ~]$ /software/apps/slurm-drmaa/current/bin/drmaa-run testscript.sh F #3b67c3 [     0.00]  * Could not load DRMAA library (DRMAA_LIBRARY_PATH=lib.slurm-22.05.6/libdrmaa.so.1) F #3b67c3 [     0.00]  * Error Thanks, Mike

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On 5/24/2023 3:23 AM, IBEXCluster wrote: Dear @mwharvey521 <https://github.com/mwharvey521> Is it possible to give it a try this workaround: |export DRMAA_LIBRARY_PATH=lib.slurm-22.05.6/libdrmaa.so.1 export LD_LIBRARY_PATH=lib.slurm-22.05.6:$LD_LIBRARY_PATH | This workaround is used as a temporary solution for our regular operation which uses slurm-drmaa. :-) — Reply to this email directly, view it on GitHub <#76 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AMWB3WCAUXXC2G5M4E53ICLXHWZNTANCNFSM6AAAAAAYFMYV6Q>. You are receiving this because you were mentioned.Message ID: ***@***.***>

[IBEXCluster]

Dear Mike,
I was referring the lib.slurm-22.05.6/ is from the old slurm library. However, please refer the master repo. Thanks to @wickhagj and he applied the patches for Slurm 23.x.x. Please pull the latest and recompile the slurm-drmaa.

1f5db98

[mwharvey521]

Thank you so much! I recompiled slurm_drmaa and my Galaxy server is functional again. Mike

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On 5/25/2023 1:40 AM, IBEXCluster wrote: Dear Mike, I was referring the lib.slurm-22.05.6/ is from the old slurm library. However, please refer the master repo. Thanks to @wickhagj and he applied the patches for Slurm 23.x.x. Please pull the latest and recompile the slurm-drmaa. 1f5db98 <1f5db98> — Reply to this email directly, view it on GitHub <#76 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AMWB3WE6PCI5P27YNF4AK73XH3WFHANCNFSM6AAAAAAYFMYV6Q>. You are receiving this because you were mentioned.Message ID: ***@***.***>

[natefoo]

Merged in #79 and will be included in the 1.1.4 release.