GitHub - ndaniel/fqtools: Tools for processing fastq files

Python tools for FASTQ processing

overlap.py gives statistics about fragment length and mates overvallings
```
  overlap.py in.fq > out.fa
```
remove_adapter.py detects the adapter automatically and removes it from the reads by trimming it
```
  overlap.py in.fq > out.fa
```
remove_str.py removes the reads which contain short tandem repeats regions
```
  overlap.py in.fq > out.fa
```
compress-reads-ids.py lossy compression of reads ids
```
  overlap.py in.fq > out.fa
```

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
LICENSE		LICENSE
README.md		README.md
compress-reads-ids.py		compress-reads-ids.py
overlap.py		overlap.py
remove_adapter.py		remove_adapter.py
remove_str.py		remove_str.py
workflow.py		workflow.py