changelog.md

Changelog

This file is meant to keep track of which annotations were changed in each dataset version. Broadly, the major version will be incremented with any change to the postprocessing code that causes every region to be regenerated (starting at v1.x.x). The minor version will be incremented with the addition of new imaging, and the patch version will be incremented with new annotations for the existing imaging.

[2.2.3] - Removed Duplicate Instance

The cyst region in 205 was an erroneous duplicate of a tumor

[2.2.2] - Official Dataset Freeze

• Merged in work by Fabian and Dasha on example Docker submissions
• Revisions to
  • case_00000
  • case_00006
  • case_00039
  • case_00050
  • case_00063
  • case_00076
  • case_00081
  • case_00113
  • case_00120
  • case_00127
  • case_00129
  • case_00133
  • case_00153
  • case_00154
  • case_00155
  • case_00176
  • case_00192
  • case_00194
  • case_00201
  • case_00205
  • case_00211
  • case_00214
  • case_00242
  • case_00246
  • case_00247
  • case_00254
  • case_00281

[2.2.1] - July 1st, 2021: Training Set Release

• Edits to nearly every case

[2.2] - July 1st, 2021

• Code for evaluation of segmentations has been added. Have a look at kits21/evaluation/readme.md
• Sampling of realistic segmentations from instance annotations
• Code for computing the inter-rater disagreement between sampled segmentations

[2.1.1] - June 28, 2021

• Complete revisions for
  • case_00167
  • case_00170
  • case_00179
  • case_00181
  • case_00182
  • case_00186
  • case_00187
  • cases 194-196
  • cases 199-201
  • cases 203-209
  • case_00211
  • case_00212
  • cases 216-233
  • case_00235
  • case_00237
  • case_00238
  • cases 240-245
  • case_00247
  • case_00249
  • case_00255
  • cases 258-263
  • case_00266
  • case_00267
  • case_00269
  • case_00270
  • case_00272
  • cases 274-277
  • case_00279
  • case_00280
  • cases 283-286
  • case_00288
  • case_00290
  • case_00293
  • case_00295
  • case_00299
• Incomplete revisions for
  • case_00168
  • case_00169
  • cases 171-178
  • case_00180
  • case_00184
  • case_00185
  • cases 188-190
  • case_00193
  • cases 197-198
  • case_00202
  • case_00210
  • case_00213
  • case_00214
  • case_00234
  • case_00236
  • case_00239
  • case_00246
  • case_00248
  • case_00278
  • case_00281
  • case_00282
  • case_00287
  • case_00289
  • case_00291
  • case_00292
  • case_00294
  • case_00296
  • case_00297
• Crowd-workers completed incomplete revisions in cases 0 - 200
  • cases 250-254
  • case_00256
  • case_00257
  • case_00264
  • case_00265
  • case_00268
  • case_00271
  • case_00273
  • case_00278
  • case_00281
  • case_00282
  • case_00287
  • case_00289
  • case_00291
  • case_00292
  • case_00294
  • case_00296
  • case_00297
• Crowd-workers completed incomplete revisions in cases 0 - 200

[2.1.0]- June 28, 2021

• Restructured the project as a python package for easier import

[2.0.6] - June 26, 2021

• Full Annotations for cases 277 - 299
• Complete revisions for
  • cases 146-148
  • cases 151-155
  • cases 159-165`
• Incomplete revisions for
  • case_00149
  • case_00151
  • case_00157
  • case_00158
  • case_00166

[2.0.5] - June 25, 2021

• Full Annotations for cases 250 - 276
• Complete revisions for
  • case_00082
  • case_00083
  • cases 85-88
  • case_00090
  • case_00092
  • case_00094
  • case_00095
  • case_00096
  • case_00099
  • cases 101-107
  • case_00109
  • case_00110
  • cases 112-116
  • cases 120-122
  • case_00125
  • case_00126
  • case_00130
  • case_00131
  • case_00134
  • case_00136
  • case_00138
  • case_00144
• Incomplete revisions for
  • case_00084
  • case_00091
  • case_00093
  • case_00097
  • case_00098
  • case_00100
  • case_00108
  • case_00111
  • cases 117-119
  • case_00123
  • case_00124
  • case_00127
  • case_00129
  • case_00132
  • case_00135
  • case_00137
  • cases 139-143
  • case_00145

[2.0.4] - June 24, 2021

• Full annotations for cases 226 - 249
• Complete revisions for
  • case_00041
  • case_00075
  • case_00076
  • case_00077
  • case_00078
  • case_00079
  • case_00080
  • case_00081

[2.0.3] - June 23, 2021

• Full annotations for cases 200 - 225
• Incomplete revisions for
  • case_00017
  • case_00019
  • case_00021
  • case_00023
  • case_00026
  • case_00033
  • case_00051
  • case_00056
  • case_00057
  • case_00058
  • case_00060
  • case_00065
  • case_00066
  • case_00068
  • case_00071
  • case_00150
• Complete revisions for
  • case_00016
  • case_00018
  • case_00020
  • case_00022
  • case_00024
  • case_00025
  • case_00027
  • case_00028
  • case_00029
  • case_00030
  • case_00031
  • case_00032
  • case_00034
  • case_00035
  • case_00036
  • case_00038
  • case_00039
  • case_00042
  • case_00050
  • case_00052
  • case_00053
  • case_00054
  • case_00055
  • case_00059
  • case_00061
  • case_00062
  • case_00064
  • case_00067
  • case_00069
  • case_00070
  • case_00072
  • case_00073
  • case_00074

[2.0.2] - June 22, 2021

• Full annotations for cases 150 - 199
• Incomplete revisions for
  • case_00000
  • case_00001
  • case_00015
  • case_00100
• Complete revisions for
  • cases 2 - 14
  • case_00101
  • case_00102

[2.0.1] - June 18, 2021

• Full annotations for cases 93 - 149

[2.0.0] - June 17, 2021

• Changed import and aggregation code to ignore ureter, artery, and vein regions
• Deleted existing ureter, artery, and vein instances that were segmented
• New annotations for cases 50 - 92

[1.0.3] - May 21, 2021

• Full annotations for
  • case_00036
  • case_00037
  • case_00038
  • case_00039
  • case_00041
  • case_00042
  • case_00044
  • case_00046
• Added cleanup function to import script which deletes unused save files

[1.0.2] - May 7, 2021

• Full annotations for
  • case_00034
  • case_00035

[1.0.1] - May 6, 2021

• Full annotations for
  • case_00030
  • case_00031
  • case_00032

[1.0.0] - May 5, 2021

• Full annotations for
  • case_00008
  • case_00025
  • case_00026
  • case_00027
  • case_00028
  • case_00029
• Two new methods for aggregation ("and" and "majority voting") and their associated files

[0.0.8] - April 29, 2021

• Full annotations for
  • case_00005
  • case_00023
  • case_00024

[0.0.7] - April 15, 2021

• Full annotations for
  • case_00020
  • case_00021
  • case_00022

[0.0.6] - April 14, 2021

• Full annotations for
  • case_00017
  • case_00018
  • case_00019

[0.0.5] - April 13, 2021

• Full annotations for
  • case_00014
  • case_00015 sans one artery segmentation -- will include next time
  • case_00016

[0.0.4] - April 12, 2021

• Full annotations for
  • case_00011 - sans one kidney annotation -- will get on next round
  • case_00012
  • case_00013

[0.0.3] - April 9, 2021

• Full annotations for
  • case_00006
  • case_00007
  • case_00009
  • case_00010

[0.0.2] - April 8, 2021

• Full annotations for:
  • case_00002
  • case_00003
  • case_00004
• Added pull_request_template.md

[0.0.1] - April 7, 2021

• Includes all imaging from the KiTS19 Challenge
• Preliminary postprocessing and aggregation -- still subject to change
• Full annotations for:
  • case_00000
  • case_00001
  • case_00006
• Partial annotations for
  • case_00002