Fix GFFREAD #697

Job	Run time
Run pipeline with test data (24.04.2 \| test \| docker)	2m 38s
Test workflow parameters (24.04.2, --skip_trimming)	21m 56s
Run pipeline with test data (latest-everything \| test \| docker)	2m 14s
Test workflow parameters (24.04.2, --skip_consensus_peaks)	22m 52s
Test workflow parameters (24.04.2, --aligner bowtie2)	25m 56s
Test workflow parameters (24.04.2, --aligner chromap)	23m 11s
Test workflow parameters (24.04.2, --aligner star)	24m 2s
Test workflow parameters (latest-everything, --skip_trimming)	21m 54s
Test workflow parameters (latest-everything, --skip_consensus_peaks)	22m 7s
Test workflow parameters (latest-everything, --aligner bowtie2)	24m 32s
Test workflow parameters (latest-everything, --aligner chromap)	23m 25s
Test workflow parameters (latest-everything, --aligner star)	26m 41s
	4h 1m 28s

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