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Merge pull request #213 from mirpedrol/fix-linting
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uncomment including pipeline config
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mirpedrol authored Oct 29, 2024
2 parents 28d66c8 + d95cefc commit eacc5e7
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -207,8 +207,7 @@ profiles {
includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null"

// Load nf-core/crisprseq custom profiles from different institutions.
// TODO nf-core: Optionally, you can add a pipeline-specific nf-core config at https://github.com/nf-core/configs
// includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/crisprseq.config" : "/dev/null"
includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/crisprseq.config" : "/dev/null"

// Set default registry for Apptainer, Docker, Podman, Charliecloud and Singularity independent of -profile
// Will not be used unless Apptainer / Docker / Podman / Charliecloud / Singularity are enabled
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