Keep original matrix file name in the annotation copy to improve resu…

…mability
nf-core · Jul 30, 2024 · 0a3927a · 0a3927a
1 parent 5a3727b
commit 0a3927a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflows/differentialabundance.nf b/workflows/differentialabundance.nf
@@ -254,7 +254,7 @@ workflow DIFFERENTIALABUNDANCE {
 
         // Otherwise we can just use the matrix input; save it to the workdir so that it does not
         // just appear wherever the user runs the pipeline
-        matrix_as_anno_filename = "${workflow.workDir}/matrix_as_anno.${matrix_file.getExtension()}"
+        matrix_as_anno_filename = "${workflow.workDir}/${matrix_file.getBaseName()}_as_anno.${matrix_file.getExtension()}"
         if (params.study_type == 'maxquant'){
             ch_features_matrix = ch_in_norm
         } else {