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Filter bgc fastas #1172

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Filter bgc fastas

Filter bgc fastas #1172

Triggered via pull request June 4, 2024 13:53
@jasmezzjasmezz
synchronize #382
filter-bgc-fastas
Status Success
Total duration 54m 38s
Artifacts –

ci.yml

on: pull_request
Matrix: Run pipeline with test data (AMP and ARG)
Matrix: Run pipeline with test data (BGC)
Matrix: Run pipeline with test data (AMP, ARG and BGC with taxonomy)
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18 warnings
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_bgc --annotation_tool ...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_bgc --annotation_tool ...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_bgc --annotation_tool bakta --an...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_bgc --annotation_tool bakta --an...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_preannotated_bgc --annotation_to...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_preannotated_bgc --annotation_to...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_bgc --annotation_tool prokka)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (23.04.0, -profile docker,test_bgc --annotation_tool prokka)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_preannotated_bgc --ann...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_preannotated_bgc --ann...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_bgc --annotation_tool ...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (BGC) (latest-everything, -profile docker,test_bgc --annotation_tool ...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (latest-everything, -profile docker,...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (23.04.0, -profile docker,test_taxon...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (latest-everything, -profile docker,...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (latest-everything, -profile docker,...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (23.04.0, -profile docker,test_taxon...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (AMP, ARG and BGC with taxonomy) (23.04.0, -profile docker,test_taxon...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.