Remove deeparg-only workflow

.github/workflows/ci.yml

@@ -71,32 +71,3 @@ jobs:
       - name: Run pipeline with test data (BGC workflow)
         run: |
           nextflow run ${GITHUB_WORKSPACE} -profile test_bgc,docker --outdir ./results ${{ matrix.parameters }} --bgc_skip_deepbgc
-
-  test_deeparg:
-    name: Run pipeline with test data (DeepARG only workflow)
-    # Only run on push if this is the nf-core dev branch (merged PRs)
-    if: "${{ github.event_name != 'push' || (github.event_name == 'push' && github.repository == 'nf-core/funcscan') }}"
-    runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        NXF_VER:
-          - "23.04.0"
-          - "latest-everything"
-        parameters:
-          - "--annotation_tool bakta --annotation_bakta_db_downloadtype light"
-          - "--annotation_tool pyrodigal"
-
-    steps:
-      - name: Check out pipeline code
-        uses: actions/checkout@v2
-
-      - name: Install Nextflow
-        uses: nf-core/setup-nextflow@v1
-        with:
-          version: "${{ matrix.NXF_VER }}"
-
-      - name: Run pipeline with test data (DeepARG workflow)
-        run: |
-          wget https://zenodo.org/record/8280582/files/deeparg.zip ## download from zenodo due to instability of deepARG server
-          unzip deeparg.zip
-          nextflow run ${GITHUB_WORKSPACE} -profile test_deeparg,docker --outdir ./results ${{ matrix.parameters }} --arg_deeparg_data 'deeparg/'