Merge branch 'dev' into gtdbtk-missing-params

nf-core · Sep 23, 2024 · c57286b · c57286b
2 parents 6183ef0 + 48a3698
commit c57286b
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -18,6 +18,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - [#667](https://github.com/nf-core/mag/pull/667) - Fix pipeline crashing if only CONCOCT selected during binning (reported and fixed by @jfy133)
 - [#670](https://github.com/nf-core/mag/pull/670) - Re-add missing GTDBTk parameters into GTDBTk module (reported by harper357, fixed by @jfy133)
+- [#672](https://github.com/nf-core/mag/pull/673) - Fix GTDB-Tk per-sample TSV files not being published in output directory (reported by @jhayer, fix by @jfy133)
 
 ### `Dependencies`
 

diff --git a/conf/modules.config b/conf/modules.config
@@ -504,7 +504,7 @@ process {
         publishDir = [
             path: { "${params.outdir}/Taxonomy/GTDB-Tk/${meta.assembler}/${meta.binner}/${meta.id}" },
             mode: params.publish_dir_mode,
-            pattern: "*.{log,tasv,tree.gz,fasta,fasta.gz}"
+            pattern: "*.{log,tsv,tree.gz,fasta,fasta.gz}"
         ]
     }