Skip to content

Pull requests: nf-core/modules

New pull request New
190 Open 5,226 Closed
190 Open 5,226 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Add new module decoupler/progeny
#7263 opened Dec 26, 2024 by atrigila • Draft
17 tasks
Added immunedeconv module
#7262 opened Dec 24, 2024 by nschcolnicov Loading…
17 tasks
PINTS Updates
#7261 opened Dec 23, 2024 by edmundmiller Loading…
@edmundmiller
Fix singularity oras images container-issue Ready for Review
#7260 opened Dec 21, 2024 by LeonHafner Loading…
17 tasks
@LeonHafner
1
CheckM2 module updates Ready for Review
#7259 opened Dec 21, 2024 by dialvarezs Loading…
2 of 17 tasks
modify custom/filterdifferentialtable to allow >=/<=
#7258 opened Dec 20, 2024 by suzannejin Loading…
15 of 17 tasks
added stub section and updated test
#7257 opened Dec 20, 2024 by MarieLataretu Loading…
4 of 5 tasks
1
Fix: arriba: rename argument and reorder alphabetically
#7255 opened Dec 20, 2024 by rannick Loading…
17 tasks
add subworkflow for functional enrichment analysis
#7254 opened Dec 20, 2024 by suzannejin • Draft
17 tasks
ADD CATPACK_DOWNLOAD
#7253 opened Dec 19, 2024 by jfy133 Loading…
17 tasks
1
10
New kma module new module Adding a new module WIP Work in progress
#7251 opened Dec 19, 2024 by Krannich479 Loading…
9 of 14 tasks
@Krannich479
14
Update Prokka to take compressed input && tidy module script Ready for Review
#7250 opened Dec 19, 2024 by prototaxites Loading…
5 of 17 tasks
2
Added BBMAP/REPAIR submodule Ready for Review update module
#7249 opened Dec 19, 2024 by mazzalab Loading…
14 tasks done
1
@mazzalab
7
READY FOR REVIEW: Adapt output declarations
#7244 opened Dec 18, 2024 by simoxb Loading…
13 tasks
2
Update gzrt to v0.9.1 container-issue Ready for Review update module
#7241 opened Dec 18, 2024 by mazzalab Loading…
12 tasks done
1
@mazzalab
6
chore(deps): update github actions
#7239 opened Dec 18, 2024 by renovate bot Loading…
2 tasks
1
Add functionality for --unknown-slide in spaceranger/count
#7233 opened Dec 17, 2024 by fasterius Loading…
1 task done
9
port mmseqs/tsv2exprofiledb to nf-test
#7232 opened Dec 17, 2024 by famosab Loading…
17 tasks
try porting mmseqs/search to nf-test
#7231 opened Dec 17, 2024 by famosab Loading…
17 tasks
5
added basicpy nftest
#7228 opened Dec 16, 2024 by kbestak Loading…
10 of 14 tasks
1
3
Move Changes action locally
#7223 opened Dec 13, 2024 by edmundmiller • Draft
@edmundmiller
4
DUMMY DELETE ME: Test if UNTAR fails on self_hosted runners
#7216 opened Dec 13, 2024 by jfy133 • Draft
17 tasks
Remove compressed flag from all mmseqs modules
#7211 opened Dec 12, 2024 by jasmezz Loading…
2 of 17 tasks
5
Add nftests custom modules
#7201 opened Dec 11, 2024 by nschcolnicov Loading…
17 tasks
36
Fix minor typos
#7177 opened Dec 8, 2024 by mribeirodantas Loading…
1 of 17 tasks
@mribeirodantas
7
ProTip! Follow long discussions with comments:>50.