Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Markdown #45

Closed
wants to merge 16 commits into from
Closed

Markdown #45

wants to merge 16 commits into from

Commits on Feb 24, 2021

  1. updated Dockerfile, matched main.nf so that it can work with it

    @subwaystation
    subwaystation committed Feb 24, 2021
    Configuration menu
    Copy the full SHA
    4a282b3 View commit details
    Browse the repository at this point in the history

Commits on Feb 25, 2021

  1. new poa-params default, smootxg -G 150, fixed CI tests

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    2e1a701 View commit details
    Browse the repository at this point in the history

  2. wfmash incoming

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    4662fb8 View commit details
    Browse the repository at this point in the history

  3. rework alignment parameter names

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    0d42617 View commit details
    Browse the repository at this point in the history

  4. bug fix in edyeet parameters

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    ef17707 View commit details
    Browse the repository at this point in the history

  5. maybe we fixed the edyeet ILLEGAL INSTRUCTION bug

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    d850574 View commit details
    Browse the repository at this point in the history

  6. maf, smooth, consensus are copied into the results folder

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    4d3e3fe View commit details
    Browse the repository at this point in the history

  7. update file naming scheme to be in sync with pggb

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    c7ee6c2 View commit details
    Browse the repository at this point in the history

  8. update tests

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    170ae25 View commit details
    Browse the repository at this point in the history

  9. updated README, help message

    @subwaystation
    subwaystation committed Feb 25, 2021
    Configuration menu
    Copy the full SHA
    8ede74a View commit details
    Browse the repository at this point in the history

Commits on Feb 26, 2021

  1. update file naming scheme

    @subwaystation
    subwaystation committed Feb 26, 2021
    Configuration menu
    Copy the full SHA
    fd53a2c View commit details
    Browse the repository at this point in the history

  2. added MultiQC, activated help message, forward --publish_dir_mode to … 

    …all processes
    @subwaystation
    subwaystation committed Feb 26, 2021
    Configuration menu
    Copy the full SHA
    ef183c4 View commit details
    Browse the repository at this point in the history

  3. update Dockerfile

    @subwaystation
    subwaystation committed Feb 26, 2021
    Configuration menu
    Copy the full SHA
    0625b55 View commit details
    Browse the repository at this point in the history

Commits on Mar 2, 2021

  1. fix markdown linting issue

    @subwaystation
    subwaystation committed Mar 2, 2021
    Configuration menu
    Copy the full SHA
    c0eab4d View commit details
    Browse the repository at this point in the history

  2. revert fix markdown linting issue

    @subwaystation
    subwaystation committed Mar 2, 2021
    Configuration menu
    Copy the full SHA
    eb1e6db View commit details
    Browse the repository at this point in the history

  3. try with old markdown settings

    @subwaystation
    subwaystation committed Mar 2, 2021
    Configuration menu
    Copy the full SHA
    a7e01b8 View commit details
    Browse the repository at this point in the history