enable writable tmpfs for singularity/apptainer

nf-core · Oct 17, 2023 · 3e66dda · 3e66dda
1 parent 6bf0935
commit 3e66dda
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -161,6 +161,7 @@ profiles {
     singularity {
         singularity.enabled    = true
         singularity.autoMounts = true
+        singularity.runOptions = '--writable-tmpfs'
         conda.enabled          = false
         docker.enabled         = false
         podman.enabled         = false
@@ -199,6 +200,7 @@ profiles {
     apptainer {
         apptainer.enabled      = true
         apptainer.autoMounts   = true
+        apptainer.runOptions   = '--writable-tmpfs'
         conda.enabled          = false
         docker.enabled         = false
         singularity.enabled    = false