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Important! Template update for nf-core/tools v2.14.1 #89

Merged
merged 7 commits into from
May 28, 2024
Merged

Important! Template update for nf-core/tools v2.14.1 #89

merged 7 commits into from
May 28, 2024

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Version 2.14.1 of nf-core/tools has just been released with updates to the nf-core template. This automated pull-request attempts to apply the relevant updates to this pipeline.

Please make sure to merge this pull-request as soon as possible, resolving any merge conflicts in the nf-core-template-merge-2.14.1 branch (or your own fork, if you prefer). Once complete, make a new minor release of your pipeline.

For instructions on how to merge this PR, please see https://nf-co.re/docs/contributing/sync/.

For more information about this release of nf-core/tools, please see the v2.14.1 release page.

@nf-core-bot nf-core-bot mentioned this pull request May 9, 2024
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github-actions bot commented May 15, 2024 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 64375e9

+| ✅ 202 tests passed       |+
#| ❔   3 tests were ignored |#
!| ❗   4 tests had warnings |!

❗ Test warnings:

  • nextflow_config - Config manifest.version should end in dev: 1.2.0
  • pipeline_todos - TODO string in main.nf: Optionally add in-text citation tools to this list.
  • pipeline_todos - TODO string in main.nf: Optionally add bibliographic entries to this list.
  • pipeline_todos - TODO string in main.nf: Only uncomment below if logic in toolCitationText/toolBibliographyText has been filled!

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.14.1
  • Run at 2024-05-28 07:29:23

@fbdtemme fbdtemme force-pushed the nf-core-template-merge-2.14.1 branch from 0c9384d to 0ab9f89 Compare May 15, 2024 08:08
@fbdtemme fbdtemme requested a review from johandahlberg May 28, 2024 07:37
johandahlberg
johandahlberg approved these changes May 28, 2024
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LGTM!

@fbdtemme fbdtemme merged commit f0bc911 into dev May 28, 2024
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@fbdtemme fbdtemme deleted the nf-core-template-merge-2.14.1 branch June 27, 2024 09:58
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@johandahlberg johandahlberg johandahlberg approved these changes

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