Merge pull request #587 from nf-core/deepvariant-update

Deepvariant update v1.6.1
nf-core · Aug 8, 2024 · 8c6b6ac · 8c6b6ac
2 parents a9f2b09 + ec16d8d
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -17,6 +17,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### `Changed`
 
+- Updated deepvariant to version 1.6.1 [#587](https://github.com/nf-core/raredisease/pull/587)
 - Parallelized vcfanno [#585](https://github.com/nf-core/raredisease/pull/585)
 - Skip ROH calling with bcftools if there are no affected samples [#579](https://github.com/nf-core/raredisease/pull/579)
 - Refactored tool citation list [#577](https://github.com/nf-core/raredisease/pull/577)

diff --git a/modules.json b/modules.json
@@ -113,7 +113,7 @@
                     },
                     "deepvariant": {
                         "branch": "master",
-                        "git_sha": "199ba086a259e1933d6e0ab7596e4a977bbd483a",
+                        "git_sha": "ccf06a896339d2a4ed8594daa9f9adb827cb8189",
                         "installed_by": ["modules"]
                     },
                     "eklipse": {

diff --git a/modules/nf-core/deepvariant/README.md b/modules/nf-core/deepvariant/README.md
diff --git a/modules/nf-core/deepvariant/main.nf b/modules/nf-core/deepvariant/main.nf