update gatk

nf-core · May 28, 2024 · c1b9b0d · c1b9b0d
1 parent 2f91f84
commit c1b9b0d
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/modules.json b/modules.json
@@ -178,7 +178,7 @@
                     },
                     "gatk4/germlinecnvcaller": {
                         "branch": "master",
-                        "git_sha": "60a7dbae179bcfa24c10294cc9a07423a239c19a",
+                        "git_sha": "cf607b7749da0a8f5ca2a1e31233e13e3159e2fe",
                         "installed_by": ["modules"]
                     },
                     "gatk4/intervallisttools": {
@@ -203,7 +203,7 @@
                     },
                     "gatk4/postprocessgermlinecnvcalls": {
                         "branch": "master",
-                        "git_sha": "60a7dbae179bcfa24c10294cc9a07423a239c19a",
+                        "git_sha": "cf607b7749da0a8f5ca2a1e31233e13e3159e2fe",
                         "installed_by": ["modules"]
                     },
                     "gatk4/preprocessintervals": {

diff --git a/modules/nf-core/gatk4/germlinecnvcaller/main.nf b/modules/nf-core/gatk4/germlinecnvcaller/main.nf
diff --git a/modules/nf-core/gatk4/postprocessgermlinecnvcalls/main.nf b/modules/nf-core/gatk4/postprocessgermlinecnvcalls/main.nf