Skip to content

Commit

Permalink
remove whitespace
Browse files Browse the repository at this point in the history
  • Loading branch information
ramprasadn committed Feb 2, 2024
1 parent 66194d6 commit c7fe536
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions workflows/raredisease.nf
Original file line number Diff line number Diff line change
Expand Up @@ -288,9 +288,9 @@ workflow RAREDISEASE {
ch_target_intervals = ch_references.target_intervals
ch_variant_catalog = params.variant_catalog ? Channel.fromPath(params.variant_catalog).map { it -> [[id:it[0].simpleName],it]}.collect()
: Channel.value([[],[]])
ch_variant_consequences_snv = params.variant_consequences_snv ? Channel.fromPath(params.variant_consequences_snv).collect()
ch_variant_consequences_snv = params.variant_consequences_snv ? Channel.fromPath(params.variant_consequences_snv).collect()
: Channel.value([])
ch_variant_consequences_sv = params.variant_consequences_sv ? Channel.fromPath(params.variant_consequences_sv).collect()
ch_variant_consequences_sv = params.variant_consequences_sv ? Channel.fromPath(params.variant_consequences_sv).collect()
: Channel.value([])
ch_vcfanno_resources = params.vcfanno_resources ? Channel.fromPath(params.vcfanno_resources).splitText().map{it -> it.trim()}.collect()
: Channel.value([])
Expand Down

0 comments on commit c7fe536

Please sign in to comment.