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Co-authored-by: Anders Jemt <jemten@users.noreply.github.com>
nf-core · Jan 22, 2024 · f1b75d4 · f1b75d4
1 parent 1b1d6a1
commit f1b75d4
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/subworkflows/local/annotate_genome_snvs.nf b/subworkflows/local/annotate_genome_snvs.nf
@@ -117,7 +117,7 @@ workflow ANNOTATE_GENOME_SNVS {
             .set { ch_for_mix }
 
         ch_for_mix.selvar.mix(ch_for_mix.cadd)
-            .map { meta, vcf -> return [meta, vcf, []]}
+            .map { meta, vcf -> return [meta, vcf, []] }
             .set { ch_vep_in }
 
 

diff --git a/subworkflows/local/annotate_mobile_elements.nf b/subworkflows/local/annotate_mobile_elements.nf
@@ -55,7 +55,7 @@ workflow ANNOTATE_MOBILE_ELEMENTS {
             ch_genome_dictionary
         )
         .vcf
-        .map { meta, vcf -> return [meta, vcf, []]}
+        .map { meta, vcf -> return [meta, vcf, []] }
         .set { ch_vep_in }
 
         ENSEMBLVEP_ME(

diff --git a/subworkflows/local/annotate_mt_snvs.nf b/subworkflows/local/annotate_mt_snvs.nf
@@ -54,7 +54,7 @@ workflow ANNOTATE_MT_SNVS {
 
         ch_for_mix.merged.mix(ch_for_mix.cadd)
             .tap { ch_haplogrep_in }
-            .map { meta, vcf -> return [meta, vcf, []]}
+            .map { meta, vcf -> return [meta, vcf, []] }
             .set { ch_vep_in }