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Add singularity containers #588
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Warning Newer version of the nf-core template is available. Your pipeline is using an old version of the nf-core template: 3.0.2. For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation. |
…er, reverting to galaxy and specifying path
To document: it seems the docker wave container does not execute STAR properly, it might not be an issue, but let's keep that in mind |
Singularity support was dropped temporarily for singularity containers when wave was use. Temporarily reintroducing docker containers until oras support is cleared out for wave containers
PR checklist
nf-core lint
).nextflow run . -profile debug,test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).