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Dev - Adding FastQC to the pipeline, with integration into MultiQC #121

Merged
merged 7 commits into from
Jul 5, 2022
Merged

Dev - Adding FastQC to the pipeline, with integration into MultiQC #121

merged 7 commits into from
Jul 5, 2022

Commits on Jun 29, 2022

  1. Adding subworkflow for FastQC

    @heylf
    heylf committed Jun 29, 2022
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  2. Integrating fastqc into the scrnaseq pipeline and into multiqc

    @heylf
    heylf committed Jun 29, 2022
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  3. adding skip_fastqc parameter to pipeline

    @heylf
    heylf committed Jun 29, 2022
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  4. adding fastqc log to output.md

    @heylf
    heylf committed Jun 29, 2022
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  5. [automated] Fix linting with Prettier

    @nf-core-bot
    nf-core-bot committed Jun 29, 2022
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Commits on Jun 30, 2022

  1. Changes to fastqc.nf, cleaning up code

    @heylf
    heylf committed Jun 30, 2022
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  2. Removing unnecessary code in scrnaseq.nf

    @heylf
    heylf committed Jun 30, 2022
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