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Bump version to 2.6.0 #320

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merged 3 commits into from
Apr 18, 2024
Merged

Bump version to 2.6.0 #320

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5b3796f
bump version and update changelog
grst Apr 16, 2024
c1e98b3
Update download_pipeline.yml
grst Apr 18, 2024
4efe296
[automated] Fix linting with Prettier
nf-core-bot Apr 18, 2024
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3 changes: 3 additions & 0 deletions .github/workflows/download_pipeline.yml
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Expand Up @@ -27,6 +27,9 @@ jobs:
download:
runs-on: ubuntu-latest
steps:
- name: Disk space cleanup
uses: jlumbroso/free-disk-space@54081f138730dfa15788a46383842cd2f914a1be # v1.3.1

- name: Install Nextflow
uses: nf-core/setup-nextflow@v1

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5 changes: 3 additions & 2 deletions CHANGELOG.md
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Expand Up @@ -3,16 +3,17 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v2.6.0dev - [date]
## v2.6.0 - 2024-04-16

- Update cellranger to v8.0.0 ([#317](https://github.com/nf-core/scrnaseq/pull/317))
- Change from pytests to nf-test ([#291](https://github.com/nf-core/scrnaseq/pull/291))
- Update template to v2.13.1 ([#309](https://github.com/nf-core/scrnaseq/pull/309))
- Update to kallisto|bustools v0.28.2 ([#294](https://github.com/nf-core/scrnaseq/pull/294))
- Fix cellrangerarc matrix conversions and protocol selection ([#300](https://github.com/nf-core/scrnaseq/pull/300))
- Add new emptydrops calling module ([#301](https://github.com/nf-core/scrnaseq/pull/301))
- Update cellranger modules to latest version ([[#316](https://github.com/nf-core/scrnaseq/issues/316)])

## v2.5.1
## v2.5.1 - 2024-01-23

- Template update to v2.12 ([#298](https://github.com/nf-core/scrnaseq/pull/298)).
- Fix that cellranger workflow couldn't be run and enable CI for this workflow ([#288](https://github.com/nf-core/scrnaseq/pull/288)).
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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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@@ -1,7 +1,7 @@
report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/scrnaseq/tree/dev" target="_blank">nf-core/scrnaseq</a>
This report has been generated by the <a href="https://github.com/nf-core/scrnaseq/releases/tag/2.6.0" target="_blank">nf-core/scrnaseq</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/scrnaseq/dev/docs/output" target="_blank">documentation</a>.
<a href="https://nf-co.re/scrnaseq/2.6.0/docs/output" target="_blank">documentation</a>.
report_section_order:
"nf-core-scrnaseq-methods-description":
order: -1000
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -282,7 +282,7 @@ manifest {
description = """Pipeline for processing 10x Genomics single cell rnaseq data"""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '2.6.0dev'
version = '2.6.0'
doi = '10.5281/zenodo.3568187'
}

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