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nf-core launch: revision selection broken #2360

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chasemc opened this issue Jul 3, 2023 · 2 comments
Closed

nf-core launch: revision selection broken #2360

chasemc opened this issue Jul 3, 2023 · 2 comments
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@chasemc
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chasemc commented Jul 3, 2023

Description of the bug

I thought it might just be non nf-core pipelines:
tools v2.8
image

tools v2.9
image

but rnaseq also not working:
image

Command used and terminal output

mamba create --name nf bioconda::nextflow>=23.04.1 bioconda::nf-core>=2.9
mamba activate nf
nf-core launch nf-core/rnaseq -r 3.12.0
Hardware (Desktop)
OS (ubuntu)


### System information

_No response_
@chasemc chasemc added the bug Something isn't working label Jul 3, 2023
@chasemc chasemc changed the title v2.9 broken? v2.9 "Could not find pipeline" Jul 3, 2023
@paoloAngelino
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I have the same issue with version v2.9, when selecting the rnaseq pipeline from the list:
nf-core launch nf-core/rnaseq
Capture

If I specify the version at the command line it works:
nf-core launch nf-core/rnaseq -r 3.12.0
Capture1

@mashehu
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mashehu commented Jul 14, 2023

thanks for reporting this, I will look into it.

@mashehu mashehu changed the title v2.9 "Could not find pipeline" nf-core launch: revision selection broken Jul 14, 2023
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