[automated] Update json files and markdown cache

nf-core · Sep 22, 2024 · ea4abab · ea4abab
1 parent 061437e
commit ea4abab
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Showing 3 changed files with 49 additions and 33 deletions.
diff --git a/.cache.tar.xz b/.cache.tar.xz
diff --git a/public/components.json b/public/components.json
@@ -7568,6 +7568,10 @@
  "name": "rnafusion",
  "version": "3.0.2"
  },
+ {
+ "name": "rnafusion",
+ "version": "3.0.2"
+ },
  {
  "name": "rnafusion",
  "version": "3.0.2"
@@ -24600,6 +24604,14 @@
  "name": "genomeassembler",
  "version": "dev"
  },
+ {
+ "name": "pathogensurveillance",
+ "version": "dev"
+ },
+ {
+ "name": "genomeassembler",
+ "version": "dev"
+ },
  {
  "name": "pathogensurveillance",
  "version": "dev"
@@ -105888,6 +105900,10 @@
  "name": "genomeassembler",
  "version": "dev"
  },
+ {
+ "name": "genomeassembler",
+ "version": "dev"
+ },
  {
  "name": "genomeassembler",
  "version": "dev"

diff --git a/public/pipelines.json b/public/pipelines.json
@@ -1440,12 +1440,12 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/atacseq",
  "created_at": "2018-11-05T17:49:32Z",
- "updated_at": "2024-09-06T08:10:09Z",
+ "updated_at": "2024-09-22T08:24:31Z",
  "pushed_at": "2024-09-19T17:39:58Z",
  "homepage": "https://nf-co.re/atacseq",
  "size": 9944,
- "stargazers_count": 179,
- "watchers_count": 179,
+ "stargazers_count": 180,
+ "watchers_count": 180,
  "language": "Nextflow",
  "has_issues": true,
  "has_projects": false,
@@ -1467,7 +1467,7 @@
  "visibility": "public",
  "forks": 116,
  "open_issues": 28,
- "watchers": 179,
+ "watchers": 180,
  "default_branch": "master",
  "temp_clone_token": "",
  "allow_squash_merge": false,
@@ -14585,12 +14585,12 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/hic",
  "created_at": "2019-04-09T14:29:19Z",
- "updated_at": "2024-09-15T14:15:03Z",
+ "updated_at": "2024-09-22T11:55:00Z",
  "pushed_at": "2024-07-18T20:38:33Z",
  "homepage": "https://nf-co.re/hic",
  "size": 3790,
- "stargazers_count": 86,
- "watchers_count": 86,
+ "stargazers_count": 87,
+ "watchers_count": 87,
  "language": "Nextflow",
  "has_issues": true,
  "has_projects": true,
@@ -14612,7 +14612,7 @@
  "visibility": "public",
  "forks": 55,
  "open_issues": 29,
- "watchers": 86,
+ "watchers": 87,
  "default_branch": "master",
  "temp_clone_token": "",
  "allow_squash_merge": false,
@@ -20545,9 +20545,9 @@
  "url": "https://api.github.com/repos/nf-core/methylseq",
  "created_at": "2018-03-12T15:46:42Z",
  "updated_at": "2024-09-21T13:49:18Z",
- "pushed_at": "2024-09-21T15:18:48Z",
+ "pushed_at": "2024-09-22T12:26:28Z",
  "homepage": "https://nf-co.re/methylseq",
- "size": 21079,
+ "size": 21107,
  "stargazers_count": 137,
  "watchers_count": 137,
  "language": "Nextflow",
@@ -22401,12 +22401,12 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/nanoseq",
  "created_at": "2019-09-09T11:23:29Z",
- "updated_at": "2024-09-20T16:46:34Z",
+ "updated_at": "2024-09-22T05:46:18Z",
  "pushed_at": "2024-09-19T09:21:57Z",
  "homepage": "https://nf-co.re/nanoseq",
  "size": 7064,
- "stargazers_count": 171,
- "watchers_count": 171,
+ "stargazers_count": 172,
+ "watchers_count": 172,
  "language": "Nextflow",
  "has_issues": true,
  "has_projects": false,
@@ -22430,7 +22430,7 @@
  "visibility": "public",
  "forks": 81,
  "open_issues": 34,
- "watchers": 171,
+ "watchers": 172,
  "default_branch": "master",
  "temp_clone_token": "",
  "allow_squash_merge": false,
@@ -30962,20 +30962,20 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/rnaseq",
  "created_at": "2018-03-29T13:10:58Z",
- "updated_at": "2024-09-20T18:03:37Z",
+ "updated_at": "2024-09-22T08:24:48Z",
  "pushed_at": "2024-09-20T15:52:33Z",
  "homepage": "https://nf-co.re/rnaseq",
  "size": 71422,
- "stargazers_count": 870,
- "watchers_count": 870,
+ "stargazers_count": 871,
+ "watchers_count": 871,
  "language": "Nextflow",
  "has_issues": true,
  "has_projects": false,
  "has_downloads": true,
  "has_wiki": false,
  "has_pages": false,
  "has_discussions": false,
- "forks_count": 695,
+ "forks_count": 694,
  "archived": false,
  "disabled": false,
  "open_issues_count": 63,
@@ -30987,9 +30987,9 @@
  "rna-seq"
  ],
  "visibility": "public",
- "forks": 695,
+ "forks": 694,
  "open_issues": 63,
- "watchers": 870,
+ "watchers": 871,
  "default_branch": "master",
  "temp_clone_token": "",
  "allow_squash_merge": false,
@@ -31023,7 +31023,7 @@
  "status": "disabled"
  }
  },
- "network_count": 695,
+ "network_count": 694,
  "subscribers_count": 152,
  "team_contributors_permission_push": true,
  "team_contributors_permission_admin": false,
@@ -33007,12 +33007,12 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/rnasplice",
  "created_at": "2022-08-22T14:25:09Z",
- "updated_at": "2024-09-03T19:12:00Z",
+ "updated_at": "2024-09-22T04:25:11Z",
  "pushed_at": "2024-08-21T19:26:03Z",
  "homepage": "https://nf-co.re/rnasplice",
  "size": 167320,
- "stargazers_count": 41,
- "watchers_count": 41,
+ "stargazers_count": 42,
+ "watchers_count": 42,
  "language": "Nextflow",
  "has_issues": true,
  "has_projects": true,
@@ -33036,7 +33036,7 @@
  "visibility": "public",
  "forks": 23,
  "open_issues": 11,
- "watchers": 41,
+ "watchers": 42,
  "default_branch": "master",
  "temp_clone_token": "",
  "allow_squash_merge": false,
@@ -36530,10 +36530,10 @@
  "fork": false,
  "url": "https://api.github.com/repos/nf-core/scdownstream",
  "created_at": "2024-06-11T06:38:31Z",
- "updated_at": "2024-09-21T16:01:01Z",
- "pushed_at": "2024-09-21T16:00:58Z",
+ "updated_at": "2024-09-22T12:51:29Z",
+ "pushed_at": "2024-09-22T12:51:25Z",
  "homepage": "https://nf-co.re/scdownstream",
- "size": 1811,
+ "size": 1822,
  "stargazers_count": 28,
  "watchers_count": 28,
  "language": "Nextflow",
@@ -36629,7 +36629,7 @@
  "contributors": [
  {
  "name": "nictru",
- "count": 381,
+ "count": 382,
  "avatar_url": "https://avatars.githubusercontent.com/u/52698566?v=4"
  },
  {
@@ -36659,9 +36659,9 @@
  }
  ],
  "released_after_tools": false,
- "head_sha": "31210acc25f91a16266e0ea91ee9193e8308fd0b",
+ "head_sha": "898132018853fde53091d927e90440026dc4b2b8",
  "last_release_is_head": false,
- "last_release_vs_default_compare_url": "https://github.com/nf-core/scdownstream/compare/31210acc25f91a16266e0ea91ee9193e8308fd0b...undefined",
+ "last_release_vs_default_compare_url": "https://github.com/nf-core/scdownstream/compare/898132018853fde53091d927e90440026dc4b2b8...undefined",
  "commits_to_dev": 30,
  "is_DSL2": true,
  "has_nf_test": false,
@@ -36675,8 +36675,8 @@
  "releases": [
  {
  "tag_name": "dev",
- "published_at": "2024-09-21T16:00:54Z",
- "tag_sha": "31210acc25f91a16266e0ea91ee9193e8308fd0b",
+ "published_at": "2024-09-22T12:51:21Z",
+ "tag_sha": "898132018853fde53091d927e90440026dc4b2b8",
  "has_schema": true,
  "doc_files": [
  "docs/output.md",