Prototype: Finalize flowchart graph diagram

workingGraph.md

@@ -2,21 +2,40 @@
 
 flowchart 
 	xf[XLSX File]
+	ips[IParams]
+	of[OBO File]
 	fips[filled IParams]
 	partiparams[partitioned IParams]
+	fipartips[filled partitioned IParams]
 	grips[grouped IParams]
-	onto[structural Ontology]
+	onto[Structural Ontology]
+	og[Ontology Graph]
+	maps[matched IParams]
+	arcgr["ARC (Metadata) Graph"]
+
 	D[ ]:::empty
+	D2[ ]:::empty
+	D3[ ]:::empty
 
-	style D width:1
-	style D height:1
-	classDef empty width:0px,height:0px;
+	style D width:0,height:0
+	style D2 width:0,height:0
+	style D3 width:0,height:0
+	classDef empty width:1px,height:0px
+	style of fill:#333,stroke-width:0,color:#777
 
-	xf -->|parseMetadataSheetFromFile| IParams
-	IParams & onto --- D
+	xf -->|parseMetadataSheetFromFile| ips
+	of --> |OboOntology.parseFromFile| onto
+	ips & onto --- D
 	D -->|addMissingTerms| fips
 	fips -->|groupWhen isHeader| partiparams
-	partiparams -->|groupTerms| grips
+	partiparams & onto --- D3
+	D3 -->|addMissingTerms| fipartips
+	fipartips -->|groupTerms| grips
+	onto -->|ontologyToGraph| og
+	grips -->|matchTerms| maps
+	maps & og --- D2
+	D2 -->|constructMetadataGraph| arcgr
 
+	linkStyle 1 stroke:#777,color:#777,arrow:#111
 
 ```