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CFDE Organizational Resources

Onboarding

New members will need a member sponsor to fill out the onboarding form after logging on to the CFDE Website. The new member will then need to accept the invitations to Slack, GitHub, Google Groups, and Groups.io to complete the onboarding process. Please note that CFDE GitHub requires 2FA be enabled for users to access CFDE private repos.

If you are having trouble accessing something you believe you should have access to, please email the HelpDesk.

Offboarding

Are you or a team member leaving the CFDE? The CFDE Offboarding form must be filled out for the offboarding member.

General Resources

Announcements and Links: Contribute links and other announcements to our consortium summary email by replying to the linked issue.

Communication Management Help: Resources for navigating Slack, GitHub, groups.io and Google Drive.

Mailing lists: A mail list guide with all of our current mailing lists.

Points of Contact: Admin and group points of contact. For a full CFDE directory see Onboarded CFDE Members.

Project Management Resources: Resources for Project Management including Personnel, GitHub Guides, and Reporting.

Technical Resources

CFDE Search Portal: Find files, biosamples, subjects, genes, proteins, diseases, and compounds associated with Common Fund data sets

Documentation: Documentation for the Cross Cut Meta Data Model (C2M2), portal submissions, and the FAIR cookbook

Knowledge Base Deposit: A scratch pad repository for adding content to the registry

Update Content Registry: A repository with scripts and workflows to build and update the CFDE search portal content registry

Training Resources

Markdown Help: CFDE produced primer on using markdown; necessary for adding and editing docs on CFDE platforms (GitHub/Website).

Portal User Guide: A tutorial describing the features and basic navigation of the CFDE search portal

Training Website: A collection of tutorials, vidoes, and other resources for learning how to perform bioinformatic analyses and access data

Code of Conduct

Activities and participants in this repository are protected by the Code of Conduct. By participating in this repository you agree to abide by the Code of Conduct.

Contributing

Please see the Contributing file for instructions for contributing to this repository.

Licensing

Contents of this repository are available under the Creative Commons Zero license, meaning that they are dedicated to the public domain. Please see the license file for more information.

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