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FR: Arbitrary output resolution (for --output-spaces) #1968

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oesteban opened this issue Feb 7, 2020 · 1 comment
Open

FR: Arbitrary output resolution (for --output-spaces) #1968

oesteban opened this issue Feb 7, 2020 · 1 comment
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derivatives effort: medium Estimated medium effort task feature impact: medium Estimated medium impact task
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@oesteban
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oesteban commented Feb 7, 2020

Follows up on #1604. After merging #1955, there is still one use-case we haven't covered: allowing arbitrary resolutions.

E.g., MNI152Lin:res-iso1.6mm

This issue reminds us of:

  1. Discuss whether this feature should be added
  2. If so, then finalize its implementation.
@oesteban oesteban added feature derivatives impact: medium Estimated medium impact task effort: medium Estimated medium effort task labels Feb 7, 2020
@oesteban oesteban added this to the 20.2.0 milestone Feb 7, 2020
@effigies
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effigies commented May 7, 2021

This issue came up for anatomical (not template) here: https://neurostars.org/t/fmriprep-different-resolution-between-bold-files-in-space-t1w-and-actual-t1w/19231/2

I think there is a valid argument to be made for upsampling, as it preserves more of the signal that's being resampled. e.g., consider the worst possible case of shifting everything by 0.5 voxel in every direction, and each resulting voxel is simply an average of the 8 voxels surrounding the corner it's being mapped onto.

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