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FIX: SyN workflow #453

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FIX: SyN workflow #453

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@mgxd mgxd commented Mar 7, 2025

Closes #393

Removes the need for a transform from MNI152NLin2009cAsym -> anatomical, as no prior will be used.

mgxd added 2 commits March 7, 2025 16:16
Additionally, fixes a bug that would use fieldmaps despite `--ignore`,
if `--use-syn-sdc` / `--force-syn` were enabled but no anatomical
estimators were found.
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codecov bot commented Mar 7, 2025

Codecov Report

Attention: Patch coverage is 0% with 6 lines in your changes missing coverage. Please review.

Project coverage is 56.46%. Comparing base (aaa532c) to head (34348f8).

Files with missing lines Patch % Lines
nibabies/workflows/base.py 0.00% 5 Missing and 1 partial ⚠️
Additional details and impacted files
@@           Coverage Diff           @@
##           master     #453   +/-   ##
=======================================
  Coverage   56.46%   56.46%           
=======================================
  Files          70       70           
  Lines        6723     6723           
  Branches      828      828           
=======================================
  Hits         3796     3796           
  Misses       2718     2718           
  Partials      209      209           

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SyN SDC incomplete
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