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multi member / bgzip compatibility #145

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multi member / bgzip compatibility #145

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15e220c
Fix inflate multistream content
Jun 3, 2018
08942f1
re-enable skipped test
rbuels Aug 31, 2018
494d03b
improve SYNC mark test and make it pass
rbuels Sep 1, 2018
3cd0bb6
add some failing tests for inflating bgzipped files
rbuels Aug 30, 2018
d3f65ab
make inflateReset discard the current inflate state
rbuels Sep 1, 2018
26d1459
improve bgzip tests
rbuels Sep 1, 2018
ee4ab1b
revert style change
rbuels Sep 1, 2018
d45ebf9
remove pre-decompressed fixture and unzip with node zlib instead to c…
rbuels Sep 1, 2018
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Binary file added test/fixtures/bgzip-1.txt.gz
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Binary file added test/fixtures/bgzip-2.txt.gz
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13 changes: 13 additions & 0 deletions test/gzip_specials.js
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Original file line number Diff line number Diff line change
Expand Up @@ -86,4 +86,17 @@ describe('Gzip special cases', function () {
assert.deepEqual(inflator.result, expectedDataArray, 'inflator produced expected data');
});

it('Read bgzipped file 1', function () {
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It will be more convenient if all 3 tests will have similar names and fixtures:

  • "Read streamed file 1" + "streamed_gzip_java.txt.gz
  • "Read streamed file 2" + "streamed_bgzip_1.txt.gz
  • "Read streamed file 3" + "streamed_bgzip_2.txt.gz

var data = fs.readFileSync(path.join(__dirname, 'fixtures/bgzip-1.txt.gz'));
var result = pako.inflate(data);

assert.equal(result.length, 65569);
});

it('Read bgzipped file 2', function () {
var data = fs.readFileSync(path.join(__dirname, 'fixtures/bgzip-2.txt.gz'));
var result = pako.inflate(data);

assert.equal(result.length, 1922918);
});
});