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Bumped MDAnalysis version to >=2.8.0,<3.0.0, ruff to >=0.6 #530

Bumped MDAnalysis version to >=2.8.0,<3.0.0, ruff to >=0.6

Bumped MDAnalysis version to >=2.8.0,<3.0.0, ruff to >=0.6 #530