Improve developer experience

README.md

@@ -66,6 +66,12 @@ To start NOMAD you need to navigate to nomad-server folder and run
 docker-compose up -d
 ```
 
+To start after updating dependencies in any package.json file you have to build new Docker images by using command 
+
+```bash
+docker-compose up -d --build
+```
+
 To stop use command
 
 ```console

docker-compose.yaml

@@ -9,7 +9,7 @@ services:
   backend:
     build: ./nomad-rest-api
     env_file:
-      - ./env/backend.env
+      - ./envs/dev/backend.env
     ports:
       - '8080:8080'
     volumes:
@@ -23,7 +23,7 @@ services:
   frontend:
     build: ./nomad-front-end
     env_file:
-      - ./env/frontend.env
+      - ./envs/dev/frontend.env
     ports:
       - '3003:3003'
     volumes:
@@ -34,6 +34,8 @@ services:
       - backend
 
   client:
+    profiles:
+      - client
     build: ../nomad-spect-client
     volumes:
       - ../nomad-spect-client/src:/app/src
@@ -42,7 +44,7 @@ services:
       - /mnt/c/Users/tl12/nomad-data-test/clientData/auto:/app/nmr-data/auto
       - /mnt/c/Users/tl12/nomad-data-test/clientData/manual:/app/nmr-data/manual
     env_file:
-      - ./env/client.env
+      - ./envs/dev/client.env
 
     depends_on:
       - backend

envs/dev/backend-test.env

@@ -0,0 +1,34 @@
+PORT=8080
+MONGODB_URL='mongodb://mongodb:27017/nomad'
+HOST='0.0.0.0'
+#Frontend host url
+FRONT_HOST_URL='http://localhost:3003'
+
+#Password for automatically generated admin user
+ADMIN_PASSWORD='foo'
+
+#JWT expiration time in seconds. Set to 10h for development
+JWT_EXPIRATION=36000
+
+#Secret word for generating JWT
+JWT_SECRET='bar'
+
+EMAIL_SUFFIX=''
+
+#SMTP configuration
+SMTP_HOST=''
+SMTP_PORT=587
+SMTP_SECURE=false
+SMTP_REQUIRE_TLS=true
+SMTP_USER=''
+SMTP_PASS=''
+SMTP_SENDER=''
+
+#Set true if NOMAD submission is used
+SUBMIT_ON=true
+
+#Set true if NOMAD datastore is used
+DATASTORE_ON=true,
+DATASTORE_PATH='/app/datastore'
+#timeout for upload data route connection
+DATA_UPLOAD_TIMEOUT=30000

envs/dev/backend.env

@@ -0,0 +1,35 @@
+NODE_ENV='dev'
+PORT=8080
+MONGODB_URL='mongodb://mongodb:27017/nomad'
+HOST='0.0.0.0'
+#Frontend host url
+FRONT_HOST_URL='http://localhost:3003'
+
+#Password for automatically generated admin user
+ADMIN_PASSWORD='foo'
+
+#JWT expiration time in seconds. Set to 10h for development
+JWT_EXPIRATION=36000
+
+#Secret word for generating JWT
+JWT_SECRET='bar'
+
+EMAIL_SUFFIX=''
+
+#SMTP configuration
+SMTP_HOST=''
+SMTP_PORT=587
+SMTP_SECURE=false
+SMTP_REQUIRE_TLS=true
+SMTP_USER=''
+SMTP_PASS=''
+SMTP_SENDER=''
+
+#Set true if NOMAD submission is used
+SUBMIT_ON=true
+
+#Set true if NOMAD datastore is used
+DATASTORE_ON=true,
+DATASTORE_PATH='/app/datastore'
+#timeout for upload data route connection
+DATA_UPLOAD_TIMEOUT=30000

env-example/frontend.env → envs/dev/frontend.env

@@ -1,4 +1,5 @@
 VITE_API_URL=http://localhost:8080/api
+VITE_SOCKETS_URL=http://localhost:8080
 VITE_NMRIUM_URL=http://localhost:3000
 
 #Set true if corresponding NOMAD modules are used

envs/example/client.env

@@ -0,0 +1,6 @@
+INSTRUMENT_ID=60361c01a94fe37cd04dd7c3
+STATUS_PATH= /app/status_files/status.html
+HISTORY_PATH=/app/status_files/status.html
+SERVER_URL=http://backend:8080
+SUBMIT_PATH=/app/submit_files/
+UPLOAD_DELAY=10000

envs/example/frontend.env

@@ -0,0 +1,7 @@
+VITE_API_URL=http://localhost:8080
+VITE_NMRIUM_URL=http://localhost:3000
+
+#Set true if corresponding NOMAD modules are used
+VITE_SUBMIT_ON=true
+VITE_BATCH_SUBMIT_ON=true
+VITE_DATASTORE_ON=true

nomad-front-end/src/socketConnection.js

@@ -1,5 +1,7 @@
 import { io } from 'socket.io-client'
 
-const socket = io(import.meta.env.PROD ? window.location.hostname : import.meta.env.VITE_API_URL)
+const socket = io(
+  import.meta.env.PROD ? window.location.hostname : import.meta.env.VITE_SOCKETS_URL
+)
 
 export default socket

nomad-rest-api/Dockerfile

@@ -6,8 +6,6 @@ COPY package.json /app/
 
 RUN npm install
 
-COPY . .
-
 EXPOSE 8080
 
-CMD ["npm", "run" , "dev-docker"]
+CMD ["npm", "run", "dev-docker"]

nomad-rest-api/package.json

@@ -5,12 +5,12 @@
   "main": "server.js",
   "type": "module",
   "scripts": {
-    "test-once": "env-cmd -f ../env/backend-test.env vitest --run",
+    "test-once": "env-cmd -f ../envs/dev/backend-test.env vitest --run",
     "test-action": "vitest --run",
-    "test": "env-cmd -f ../env/backend-test.env vitest --reporter verbose",
-    "coverage": "env-cmd -f ../env/backend-test.env vitest run --coverage",
-    "start": "env-cmd -f ../env/api-no-docker.env node server.js",
-    "dev": "env-cmd -f ../env/api-no-docker.env nodemon server.js",
+    "test": "env-cmd -f ../envs/dev/backend-test.env vitest --reporter verbose",
+    "coverage": "env-cmd -f ../envs/dev/backend-test.env vitest run --coverage",
+    "start": "env-cmd -f ../envs/dev/api-no-docker.env node server.js",
+    "dev": "env-cmd -f ../envs/dev/api-no-docker.env nodemon server.js",
     "dev-docker": "nodemon server.js"
   },
   "keywords": [],